Jacob Heilmann-Clausen

Jacob Heilmann-Clausen

Associate Professor

Member of:


    1. 2016
    2. Published

      Reintroduction of threatened fungal species via inoculation

      Abrego, N., Oivanen, P., Viner, I., Nordén, J., Penttilä, R., Dahlberg, A., Heilmann-Clausen, Jacob, Somervuo, P., Ovaskainen, O. & Schigel, D., Nov 2016, In: Biological Conservation. 203, p. 120-124 5 p.

      Research output: Contribution to journalLetterResearchpeer-review

    3. Published

      What determines spatial bias in citizen science? Exploring four recording schemes with different proficiency requirements

      Geldmann, Jonas, Heilmann-Clausen, Jacob, Holm, T. E., Levinsky, I., Markussen, Bo, Olsen, K., Rahbek, Carsten & Tøttrup, Anders P., Nov 2016, In: Diversity and Distributions. 22, 11, p. 1139-1149 11 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    4. 2017
    5. Published
    6. Published

      Big data integration: pan-European fungal species observations' assembly for addressing contemporary questions in ecology and global change biology

      Andrew, C., Heegaard, E., Kirk, P. M., Bässler, C., Heilmann-Clausen, Jacob, Krisai-Greilhuber, I., Kuyper, T. W., Senn-Irlet, B., Büntgen, U., Diez, J., Egli, S., Gange, A. C., Halvorsen, R., Høiland, K., Nordén, J., Rustøen, F., Boddy, L. & Kauserud, H., Mar 2017, In: Fungal Biology Reviews. 31, 2, p. 88-98 11 p.

      Research output: Contribution to journalReviewResearchpeer-review

    7. Published

      Mean spore size and shape in ectomycorrhizal and saprotrophic assemblages show strong responses under resource constraints

      Halbwachs, H., Heilmann-Clausen, Jacob & Bässler, C., Apr 2017, In: Fungal Ecology. 26, p. 59-64 6 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    8. Published

      State of the art and future directions for mycological research in old-growth forests

      Heilmann-Clausen, Jacob, Adamcík, S., Bässler, C., Halme, P., Krisai-Greilhuber, I. & Holec, J., Jun 2017, In: Fungal Ecology. 27, Part B, p. 141-144 4 p.

      Research output: Contribution to journalEditorialResearch

    9. Published

      Taxonomy of Tricholoma in northern Europe based on ITS sequence data and morphological characters

      Heilmann-Clausen, Jacob, Christensen, M., Frøslev, Tobias Guldberg & Kjøller, Rasmus, Jun 2017, In: Persoonia. 38, p. 38-57 20 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    10. Published

      The history and future of fungi as biodiversity surrogates in forests

      Halme, P., Holec, J. & Heilmann-Clausen, Jacob, Jun 2017, In: Fungal Ecology. 27, Part B, p. 193-201 9 p.

      Research output: Contribution to journalReviewResearchpeer-review

    11. Published

      Understanding the distribution of wood-inhabiting fungi in European beech reserves from species-specific habitat models

      Abrego, N., Christensen, M., Bässler, C., Ainsworth, A. M. & Heilmann-Clausen, Jacob, Jun 2017, In: Fungal Ecology. 27, Part B, p. 168-174 7 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    12. Published

      Interaction type and intimacy structure networks between forest-dwelling organisms and their host trees

      Mazziotta, A., Vizentin-Bugoni, J., Tøttrup, Anders P., Bruun, Hans Henrik, Fritz, Ö. & Heilmann-Clausen, Jacob, Nov 2017, In: Basic and Applied Ecology. 24, p. 86-97 12 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    13. 2018
    14. Published

      Anbefalinger vedrørende omstilling og forvaltning af skov til biodiversitetsformål: Udarbejdet for Naturstyrelsen

      Møller, P. F., Heilmann-Clausen, Jacob, Johannsen, VK, Buttenschøn, Rita M., Schmidt, Inger Kappel, Rahbek, Carsten, Bruun, Hans Henrik & Ejrnæs, R., 2018, København: GEUS. 86 p. (Danmarks og Grønlands Geologiske Undersøgelse Rapport; No. 28, Vol. 2018).

      Research output: Book/ReportReportCommissionedpeer-review

    15. Published

      Are ungulates in forests concerns or key species for conservation and biodiversity? Reply to Boulanger et al. (DOI: 10.1111/gcb.13899)

      Fløjgaard, C., Bruun, Hans Henrik, Hansen, M. D. D., Heilmann-Clausen, Jacob, Svenning, J. & Ejrnæs, R., 2018, In: Global Change Biology. 24, 3, p. 869-871 3 p.

      Research output: Contribution to journalLetterResearchpeer-review

    16. Published

      Do plant-based biogeographical regions shape aphyllophoroid fungal communities in Europe?

      Ordynets, A., Heilmann-Clausen, Jacob, Savchenko, A., Bässler, C., Volobuev, S., Akulov, O., Karadelev, M., Kotiranta, H., Saitta, A., Langer, E. & Abrego, N., 2018, In: Journal of Biogeography. 45, 5, p. 1182-1195 14 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    17. Published

      Explaining European fungal fruiting phenology with climate variability

      Andrew, C., Heegaard, E., Hoiland, K., Senn-Irlet, B., Kuyper, T. W., Krisai-Greilhuber, I., Kirk, P. M., Heilmann-Clausen, Jacob, Gange, A. C., Egli, S., Bässler, C., Büntgen, U., Boddy, L. & Kauserud, H., 2018, In: Ecology. 99, 6, p. 1306-1315 10 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    18. Published

      Fungal spore diversity reflects substrate-specific deposition challenges

      Calhim, S., Halme, P., Petersen, J. H., Læssøe, Thomas, Bässler, C. & Heilmann-Clausen, Jacob, 2018, In: Scientific Reports. 8, 9 p., 5356 .

      Research output: Contribution to journalJournal articleResearchpeer-review

    19. Published

      Muligheder på Naturstyrelsens arealer for bedre opfyldelse af 2020-mål for truede arter

      Buchwald, E. & Heilmann-Clausen, Jacob, 2018, København: Københavns Universitet. 67 p.

      Research output: Book/ReportReportResearchpeer-review

    20. Published

      Trait-dependent distributional shifts in fruiting of common British fungi

      Gange, A. C., Heegaard, E., Boddy, L., Andrew, C., Kirk, P., Halvorsen, R., Kuyper, T. W., Baessler, C., Diez, J., Heilmann-Clausen, Jacob, Høiland, K., Büntgen, U. & Kauserud, H., 2018, In: Ecography. 41, 1, p. 51-61 11 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    21. Published

      Hvilke skove bør udlægges til natur?

      Rahbek, Carsten, Højgård Petersen, A., Bladt, J., Bruun, Hans Henrik, Ejrnæs, R. & Heilmann-Clausen, Jacob, 22 Jan 2018, In: Jyllands-Posten. p. 19 1 p.

      Research output: Contribution to journalContribution to newspaper - Feature articleCommunication

    22. Published

      Continental-scale macrofungal assemblage patterns correlate with climate, soil carbon and nitrogen deposition

      Andrew, C., Halvorsen, R., Heegaard, E., Kuyper, T. W., Heilmann-Clausen, Jacob, Krisai-greilhuber, I., Bässler, C., Egli, S., Gange, A. C., Høiland, K., Kirk, P. M., Senn-irlet, B., Boddy, L., Büntgen, U. & Kauserud, H., 1 Aug 2018, In: Journal of Biogeography. 45, 8, p. 1942-1953

      Research output: Contribution to journalJournal articleResearchpeer-review

    23. 2019
    24. Published

      Arthropod communities in fungal fruitbodies are weakly structured by climate and biogeography across European beech forests

      Friess, N., Müller, J. C., Aramendi, P., Bässler, C., Brändle, M., Bouget, C., Brin, A., Bussler, H., Georgiev, K. B., Gil, R., Gossner, M. M., Heilmann-Clausen, J., Isacsson, G., Kristin, A., Lachat, T., Larrieu, L., Magnanou, E., Maringer, A., Mergner, U., Mikolas, M. & 11 others, Opgenoorth, L., Schmidl, J., Svoboda, M., Thorn, S., Vandekerkhove, K., Vrezec, A., Wagner, T., Winter, M., Zapponi, L., Brandl, R. & Seibold, S., 2019, In: Diversity and Distributions. 25, 5, p. 783-796

      Research output: Contribution to journalJournal articleResearchpeer-review

    25. Published
    26. Published

      Congruent patterns of functional diversity in saproxylic beetles and fungi across European beech forests

      Hagge, J., Abrego, N., Bässler, C., Bouget, C., Brin, A., Brustel, H., Christensen, M., Gossner, M. M., Heilmann-Clausen, Jacob, Horák, J., Gruppe, A., Isacsson, G., Köhler, F., Lachat, T., Larrieu, L., Schlaghamersky, J., Thorn, S., Zapponi, L. & Müller, J., 2019, In: Journal of Biogeography. 46, 5, p. 1054-1065

      Research output: Contribution to journalJournal articleResearchpeer-review

    27. Published

      Danmarks Svampeatlas 2009-2013

      Heilmann-Clausen, Jacob, Læssøe, Thomas, Frøslev, Tobias Guldberg & Petersen, J. H., 2019, Svampetryk. 350 p.

      Research output: Book/ReportBookCommunication

    28. Published

      Danmarks Svampeatlas – 2018-sæsonen

      Heilmann-Clausen, Jacob, Frøslev, Tobias Guldberg, Læssøe, Thomas, Jeppesen, T. S., Petersen, J. H. & Søchting, Ulrik, 2019, In: Svampe. 79, p. 52-55

      Research output: Contribution to journalJournal articleCommunication

    29. Published

      European mushroom assemblages are darker in cold climates

      Krah, F-S., Buntgen, U., Schaefer, H., Mueller, J., Andrew, C., Boddy, L., Diez, J., Egli, S., Freckleton, R., Gange, A. C., Halvorsen, R., Heegaard, E., Heideroth, A., Heibl, C., Heilmann-Clausen, J., Hoiland, K., Kar, R., Kauserud, H., Kirk, P. M., Kuyper, T. W. & 5 others, Krisai-Greilhuber, I., Norden, J., Papastefanou, P., Senn-Irlet, B. & Baessler, C., 2019, In: Nature Communications. 10, 11 p., 2890.

      Research output: Contribution to journalJournal articleResearchpeer-review

    30. Published

      How citizen science boosted primary knowledge on fungal biodiversity in Denmark

      Heilmann-Clausen, Jacob, Bruun, Hans Henrik, Ejrnæs, R., Frøslev, Tobias Guldberg, Læssøe, Thomas & Petersen, J. H., 2019, In: Biological Conservation. 237, p. 366-372 7 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    31. Published

      Kortlægning og overvågning af statens udpegninger af urørt skov og anden biodiversitetsskov

      Ejrnæs, R., Johannsen, VK, Heilmann-Clausen, Jacob, Højgaard Petersen , A., Dalby, L., Bladt, J., Karlsson Nyed, Patrik & Christensen, A. A., 2019, 1 ed. Aarhus Universitet. 82 p. (Videnskabelig rapport fra DCE – Nationalt Center for Miljø og Energi, Vol. 328).

      Research output: Book/ReportReportResearchpeer-review

    32. Published

      Man against machine: do fungal fruitbodies and eDNA give similar biodiversity assessments across broad environmental gradients?

      Frøslev, Tobias Guldberg, Kjøller, Rasmus, Bruun, Hans Henrik, Ejrnæs, R., Hansen, Anders Johannes, Læssøe, Thomas & Heilmann-Clausen, Jacob, 2019, In: Biological Conservation. 233, p. 201-212 12 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    33. Published

      Open-source data reveal how collections-based fungal diversity is sensitive to global change

      Andrew, C., Buentgen, U., Egli, S., Senn-Irlet, B., Grytnes, J., Heilmann-Clausen, Jacob, Boddy, L., Bässler, C., Gange, A. C., Heegaard, E., Høiland, K., Kirk, P. M., Krisai-Greilhüber, I., Kuyper, T. W. & Kauserud, H., 2019, In: Applications in Plant Sciences. 7, 3, p. 1-19 e01227.

      Research output: Contribution to journalJournal articleResearchpeer-review

    34. Published

      Virkemiddelkatalog for natur: De vigtigste mål i biodiversitetsforvaltningen og deres tilhørende virkemidler

      Ejrnæs, R., Bruun, Hans Henrik, Heilmann-Clausen, Jacob & Strandberg, B., 2019, Aarhus Universitet. 54 p.

      Research output: Book/ReportReportResearchpeer-review

    35. Published

      Biodiversiteten er i tilbagegang – også på statens arealer

      Ejrnæs, R., Svenning, J., Bruun, Hans Henrik, Heilmann-Clausen, Jacob, Rahbek, Carsten & Hansen, M. D. D., 22 Jan 2019, In: Altinget.dk. 1 p.

      Research output: Contribution to journalContribution to newspaper - Comment/debateCommunication

    36. Published

      Handbook for the measurement of macrofungal functional traits: A start with basidiomycete wood fungi

      Dawson, S. K., Boddy, L., Halbwachs, H., Baessler, C., Andrew, C., Crowther, T. W., Heilmann-Clausen, Jacob, Norden, J., Ovaskainen, O. & Jonsson, M., Mar 2019, In: Functional Ecology. 33, 3, p. 372-387

      Research output: Contribution to journalReviewResearchpeer-review

    37. Published

      Vi brænder de træer, der skulle hente CO2 ud af atmosfæren

      Bruun, Hans Henrik, Ejrnæs, R., Heilmann-Clausen, Jacob & Thomsen, K., Oct 2019

      Research output: Other contributionNet publication - Internet publicationCommunication

    38. 2020
    39. Published

      Pluteus dianae and P. punctatus resurrected, with first records from eastern and northern Europe

      Sevcikova, H., Malysheva, E. F., Justo, A., Heilmann-Clausen, Jacob & Tomsovsky, M., 2020, In: Mycotaxon. 135, 2, p. 245-274 30 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    40. Published

      Fungi recognition: A practical use case

      Sulc, M., Picek, L., Matas, J., Jeppesen, T. S. & Heilmann-Clausen, Jacob, 2020, Proceedings - 2020 IEEE Winter Conference on Applications of Computer Vision, WACV 2020. Institute of Electrical and Electronics Engineers Inc., p. 2305-2313 9 p. 9093624. (Proceedings - 2020 IEEE Winter Conference on Applications of Computer Vision, WACV 2020).

      Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

    41. Published

      Nyt fra svampeatlas

      Heilmann-Clausen, Jacob, Frøslev, Tobias Guldberg, Jeppesen, T. S., Læssøe, Thomas, Lange, C., Lind, E. M. & Søchting, Ulrik, 2020, In: Svampe. 81, p. 35-42

      Research output: Contribution to journalJournal articleCommunication

    42. Published

      Quality of substrate and forest structure determine macrofungal richness along a gradient of management intensity in beech forests

      Atrena, A., Banelytė, G. G., Læssøe, Thomas, Riis-Hansen, R., Bruun, Hans Henrik, Rahbek, Carsten & Heilmann-Clausen, Jacob, 2020, In: Forest Ecology and Management. 478, 12 p., 118512.

      Research output: Contribution to journalJournal articleResearchpeer-review

    43. Published

      Biologer om "Klimaskoven": Grov forenkling af virkeligheden og misvisende

      Bruun, Hans Henrik & Heilmann-Clausen, Jacob, 9 Mar 2020, In: JA Aktuelt.

      Research output: Contribution to journalContribution to newspaper - Comment/debateCommunication

    44. Published

      Simple attributes predict the importance of plants as hosts to the richness of fungi and arthropods

      Bruun, Hans Henrik, Brunbjerg, A. K., Dalby, L., Fløjgaard, C., Frøslev, Tobias Guldberg, Haarder, S., Heilmann-Clausen, Jacob, Høye, T. T., Læssøe, Thomas & Ejrnæs, R., 18 Apr 2020, bioRxiv, 27 p. (bioRxiv).

      Research output: Working paperPreprintResearch

    45. Published
    46. Published

      Genopretning af biodiversitet og økosystemer i Danmark: Ekspertudtalelse

      Barfod, A., Bruun, Hans Henrik, Clausen, P., Dinesen, Lars, Egemose, S., Ejrnæs, R., Fløjgaard, C., Heilmann-Clausen, Jacob, Kragh, T., Petersen, Anders Højgård, Rahbek, Carsten, Roth, E., Raulund-Rasmussen, Karsten, Schou, Jesper Sølver, Svenning, J. & Søndergaard, M., Jun 2020, Det danske IPBES-samarbejde. 17 p.

      Research output: Book/ReportReportResearchpeer-review

    47. Published

      Forskere i biodiversitet: Vildere natur er ikke en trussel mod naturen

      Bruun, Hans Henrik, Svenning, J., Rahbek, Carsten, Heilmann-Clausen, Jacob, Hansen, M. D. D. & Ejrnæs, R., 17 Nov 2020, In: Altinget.dk.

      Research output: Contribution to journalContribution to newspaper - Comment/debateCommunication

    48. 2021
    49. Published

      Detecting flying insects using car nets and DNA metabarcoding

      Svenningsen, Cecilie, Frøslev, Tobias Guldberg, Bladt, J., Pedersen, Lene Bruhn, Larsen, Jonas Colling, Ejrnaes, R., Flojgaard, C., Hansen, Anders Johannes, Heilmann-Clausen, Jacob, Dunn, R. R. & Tøttrup, Anders P., 2021, In: Biology Letters. 17, 3, 6 p., 20200833.

      Research output: Contribution to journalLetterResearchpeer-review

    50. Published

      First Evidence That Nematode Communities in Deadwood Are Related to Tree Species Identity and to Co-Occurring Fungi and Prokaryotes

      Moll, J., Roy, F., Bässler, C., Heilmann-Clausen, Jacob, Hofrichter, M., Kellner, H., Krabel, D., Schmidt, J. H., Buscot, F. & Hoppe, B., 2021, In: Microorganisms. 9, 7, 15 p., 1454.

      Research output: Contribution to journalJournal articleResearchpeer-review

    51. Published

      Handbook of field sampling for multi-taxon biodiversity studies in European forests

      Burrascano, S., Trentanovi, G., Paillet, Y., Heilmann-Clausen, J., Giordani, P., Bagella, S., Bravo-Oviedo, A., Campagnaro, T., Campanaro, A., Francesco, C., De Smedt, P., Itziar, G. M., Matošević, D., Sitzia, T., Aszalós, R., Brazaitis, G., Andrea, C., Ettore, DA. A., Doerfler, I., Hofmeister, J. & 24 others, Hošek, J., Janssen, P., Kepfer Rojas, Sebastian, Korboulewsky, N., Kozák, D., Lachat, T., Lõhmus, A., Lopez, R., Mårell, A., Matula, R., Mikoláš, M., Munzi, S., Nordén, B., Pärtel, M., Penner, J., Runnel, K., Schall, P., Svoboda, M., Tinya, F., Ujházyová, M., Vandekerkhove, K., Verheyen, K., Xystrakis, F. & Ódor, P., 2021, In: Ecological Indicators. 132, 13 p., 108266.

      Research output: Contribution to journalReviewResearchpeer-review

    52. Published

      Molecular biogeography of the fungus-dwelling saproxylic beetle Bolitophagus reticulatus indicates rapid expansion from glacial refugia

      Eberle, J., Husemann, M., Doerfler, I., Ulrich, W., Müller, J., Bouget, C., Brin, A., Gossner, M. M., Heilmann-Clausen, Jacob, Isacsson, G., Krištín, A., Lachat, T., Larrieu, L., Rigling, A., Schmidl, J., Seibold, S., Vandekerkhove, K. & Habel, J. C., 2021, In: Biological Journal of the Linnean Society. 133, 3, p. 766-778 13 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    53. Published

      The Global Soil Mycobiome consortium dataset for boosting fungal diversity research

      Tedersoo, L., Mikryukov, V., Anslan, S., Bahram, M., Khalid, A. N., Corrales, A., Agan, A., Vasco-Palacios, A. M., Saitta, A., Antonelli, A., Rinaldi, A. C., Verbeken, A., Sulistyo, B. P., Tamgnoue, B., Furneaux, B., Ritter, C. D., Nyamukondiwa, C., Sharp, C., Marín, C., Dai, D. Q. & 75 others, Gohar, D., Sharmah, D., Biersma, Elisabeth M., Cameron, E. K., De Crop, E., Otsing, E., Davydov, E. A., Albornoz, F. E., Brearley, F. Q., Buegger, F., Gates, G., Zahn, G., Bonito, G., Hiiesalu, I., Hiiesalu, I., Zettur, I., Barrio, I. C., Pärn, J., Heilmann-Clausen, Jacob, Ankuda, J., Kupagme, J. Y., Sarapuu, J., Maciá-Vicente, J. G., Fovo, J. D., Geml, J., Alatalo, J. M., Alvarez-Manjarrez, J., Monkai, J., Põldmaa, K., Runnel, K., Adamson, K., Bråthen, K. A., Pritsch, K., Tchan, K. I., Armolaitis, K., Hyde, K. D., Newsham, K. K., Panksep, K., Adebola, L. A., Lamit, L. J., Saba, M., da Silva Cáceres, M. E., Tuomi, M., Gryzenhout, M., Bauters, M., Bálint, M., Wijayawardene, N., Hagh-Doust, N., Yorou, N. S., Kurina, O., Mortimer, P. E., Meidl, P., Nilsson, R. H., Puusepp, R., Casique-Valdés, R., Drenkhan, R., Garibay-Orijel, R., Godoy, R., Alfarraj, S., Rahimlou, S., Põlme, S., Dudov, S. V., Mundra, S., Ahmed, T., Netherway, T., Henkel, T. W., Roslin, T., Fedosov, V. E., Onipchenko, V. G., Yasanthika, W. A. E., Lim, Y. W., Piepenbring, M., Klavina, D., Kõljalg, U. & Abarenkov, K., 2021, In: Fungal Diversity. 111, 1, p. 573-588

      Research output: Contribution to journalJournal articleResearchpeer-review

    54. Published

      What is unmanaged forest and how does it sustain biodiversity in landscapes with a long history of intensive forestry?

      Bruun, Hans Henrik & Heilmann-Clausen, Jacob, 2021, In: Journal of Applied Ecology. 58, 9, p. 1813-1816 4 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    55. 2022
    56. Published

      Pluteus insidiosus Complex, Four New Species Described and Pluteus reisneri Resurrected

      Sevcikova, H., Ferisin, G., Malysheva, E., Justo, A., Heilmann-Clausen, Jacob, Horak, E., Kalinina, L., Kaygusuz, O., Knudsen, H., Menolli, N., Moreau, P., Munoz Gonzalez, G., Saar, I., Türkekul, I. & Dovana, F., 2022, In: Journal of Fungi. 8, 6, 26 p., 623.

      Research output: Contribution to journalJournal articleResearchpeer-review

    57. Published

      Automatic Fungi Recognition: Deep Learning Meets Mycology

      Picek, L., Šulc, M., Matas, J., Heilmann-Clausen, Jacob, Jeppesen, T. S. & Lind, E., 2022, In: Sensors. 22, 2, 22 p., 633.

      Research output: Contribution to journalJournal articleResearchpeer-review

    ID: 18506117