Jacob Heilmann-Clausen

Jacob Heilmann-Clausen

Associate Professor

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    ORCID: 0000-0003-4713-6004

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    1. Published

      Holarctic Species in the Pluteus podospileus Clade: Description of Six New Species and Reassessment of Old Names

      Ševčíková, H., Malysheva, E. F., Antonín, V., Borovička, J., Dovana, F., Ferisin, G., Eyssartier, G., Grootmyers, D., Heilmann-Clausen, Jacob, Kalichman, J., Kaygusuz, O., Lebeuf, R., González, G. M., Minnis, A. M., Russell, S. D., Saar, I., Nielsen, Ida Broman, Frøslev, Tobias Guldberg & Justo, A., 2023, In: Journal of Fungi. 9, 9, 55 p., 898.

      Research output: Contribution to journal › Journal article › Research › peer-review

    2. Published

      Words apart: Standardizing forestry terms and definitions across European biodiversity studies

      Trentanovi, G., Campagnaro, T., Sitzia, T., Chianucci, F., Vacchiano, G., Ammer, C., Ciach, M., Nagel, T. A., del Río, M., Paillet, Y., Munzi, S., Vandekerkhove, K., Bravo-Oviedo, A., Cutini, A., D'Andrea, E., De Smedt, P., Doerfler, I., Fotakis, D., Heilmann-Clausen, J., Hofmeister, J. & 19 others, Hošek, J., Janssen, P., Kepfer Rojas, Sebastian, Korboulewsky, N., Kovács, B., Kozák, D., Lachat, T., Mårell, A., Matula, R., Mikoláš, M., Nordén, B., Ódor, P., Perović, M., Pötzelsberger, E., Schall, P., Svoboda, M., Tinya, F., Ujházyová, M. & Burrascano, S., 2023, In: Forest Ecosystems. 10, 13 p., 100128.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Published

      A synthesis of multi-taxa management experiments to guide forest biodiversity conservation in Europe

      Tinya, F., Doerfler, I., de Groot, M., Heilman-Clausen, J., Kovács, B., Mårell, A., Nordén, B., Aszalós, R., Bässler, C., Brazaitis, G., Burrascano, S., Camprodon, J., Chudomelová, M., Čížek, L., D'Andrea, E., Gossner, M., Halme, P., Hédl, R., Korboulewsky, N., Kouki, J. & 25 others, Kozel, P., Lõhmus, A., López, R., Máliš, F., Martín, J. A., Matteucci, G., Mattioli, W., Mundet, R., Müller, J., Nicolas, M., Oldén, A., Piqué, M., Preikša, Ž., Ciuró, J. R., Remm, L., Schall, P., Šebek, P., Seibold, S., Simončič, P., Ujházy, K., Ujházyová, M., Vild, O., Vincenot, L., Weisser, W. & Ódor, P., 2023, In: Global Ecology and Conservation. 46, 17 p., e02553.

      Research output: Contribution to journal › Review › Research › peer-review

    4. Published

      The Global Soil Mycobiome consortium dataset for boosting fungal diversity research

      Tedersoo, L., Mikryukov, V., Anslan, S., Bahram, M., Khalid, A. N., Corrales, A., Agan, A., Vasco-Palacios, A. M., Saitta, A., Antonelli, A., Rinaldi, A. C., Verbeken, A., Sulistyo, B. P., Tamgnoue, B., Furneaux, B., Ritter, C. D., Nyamukondiwa, C., Sharp, C., Marín, C., Dai, D. Q. & 75 others, Gohar, D., Sharmah, D., Biersma, Elisabeth M., Cameron, E. K., De Crop, E., Otsing, E., Davydov, E. A., Albornoz, F. E., Brearley, F. Q., Buegger, F., Gates, G., Zahn, G., Bonito, G., Hiiesalu, I., Hiiesalu, I., Zettur, I., Barrio, I. C., Pärn, J., Heilmann-Clausen, Jacob, Ankuda, J., Kupagme, J. Y., Sarapuu, J., Maciá-Vicente, J. G., Fovo, J. D., Geml, J., Alatalo, J. M., Alvarez-Manjarrez, J., Monkai, J., Põldmaa, K., Runnel, K., Adamson, K., Bråthen, K. A., Pritsch, K., Tchan, K. I., Armolaitis, K., Hyde, K. D., Newsham, K. K., Panksep, K., Adebola, L. A., Lamit, L. J., Saba, M., da Silva Cáceres, M. E., Tuomi, M., Gryzenhout, M., Bauters, M., Bálint, M., Wijayawardene, N., Hagh-Doust, N., Yorou, N. S., Kurina, O., Mortimer, P. E., Meidl, P., Nilsson, R. H., Puusepp, R., Casique-Valdés, R., Drenkhan, R., Garibay-Orijel, R., Godoy, R., Alfarraj, S., Rahimlou, S., Põlme, S., Dudov, S. V., Mundra, S., Ahmed, T., Netherway, T., Henkel, T. W., Roslin, T., Fedosov, V. E., Onipchenko, V. G., Yasanthika, W. A. E., Lim, Y. W., Piepenbring, M., Klavina, D., Kõljalg, U. & Abarenkov, K., 2021, In: Fungal Diversity. 111, 1, p. 573-588

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. Published

      Global patterns in endemicity and vulnerability of soil fungi

      Tedersoo, L., Mikryukov, V., Zizka, A., Bahram, M., Hagh-Doust, N., Anslan, S., Prylutskyi, O., Delgado-Baquerizo, M., Maestre, F. T., Pärn, J., Öpik, M., Moora, M., Zobel, M., Espenberg, M., Mander, Ü., Khalid, A. N., Corrales, A., Agan, A., Vasco-Palacios, A-M., Saitta, A. & 84 others, Rinaldi, A. C., Verbeken, A., Sulistyo, B. P., Tamgnoue, B., Furneaux, B., Ritter, C. D., Nyamukondiwa, C., Sharp, C., Marín, C., Gohar, D., Klavina, D., Sharmah, D., Dai, D. Q., Nouhra, E., Biersma, Elisabeth M., Rähn, E., Cameron, E. K., De Crop, E., Otsing, E., Davydov, E. A., Albornoz, F. E., Brearley, F. Q., Buegger, F., Zahn, G., Bonito, G., Hiiesalu, I., Barrio, I. C., Heilmann-Clausen, Jacob, Ankuda, J., Kupagme, J. Y., Maciá-Vicente, J. G., Fovo, J. D., Geml, J., Alatalo, J. M., Alvarez-Manjarrez, J., Põldmaa, K., Runnel, K., Adamson, K., Bråthen, K. A., Pritsch, K., Tchan, K. I., Armolaitis, K., Hyde, K. D., Newsham, K. K., Panksep, K., Lateef, A. A., Tiirmann, L., Hansson, L., Lamit, L. J., Saba, M., Tuomi, M., Gryzenhout, M., Bauters, M., Piepenbring, M., Wijayawardene, N., Yorou, N. S., Kurina, O., Mortimer, P. E., Meidl, P., Kohout, P., Nilsson, R. H., Puusepp, R., Drenkhan, R., Garibay-Orijel, R., Godoy, R., Alkahtani, S., Rahimlou, S., Dudov, S. V., Põlme, S., Ghosh, S., Mundra, S., Ahmed, T., Netherway, T., Henkel, T. W., Roslin, T., Nteziryayo, V., Fedosov, V. E., Onipchenko, V. G., Yasanthika, W. A. E., Lim, Y. W., Soudzilovskaia, N. A., Antonelli, A., Kõljalg, U. & Abarenkov, K., 2022, In: Global Change Biology. 28, 22, p. 6696-6710 15 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      Detecting flying insects using car nets and DNA metabarcoding

      Svenningsen, Cecilie, Frøslev, Tobias Guldberg, Bladt, J., Pedersen, Lene Bruhn, Larsen, Jonas Colling, Ejrnaes, R., Flojgaard, C., Hansen, Anders Johannes, Heilmann-Clausen, Jacob, Dunn, R. R. & Tøttrup, Anders P., 2021, In: Biology Letters. 17, 3, 6 p., 20200833.

      Research output: Contribution to journal › Letter › Research › peer-review

    7. Published

      Flying insect biomass is negatively associated with urban cover in surrounding landscapes

      Svenningsen, C. S., Bowler, D. E., Hecker, S., Bladt, J., Grescho, V., van Dam, N. M., Dauber, J., Eichenberg, D., Ejrnæs, R., Fløjgaard, C., Frenzel, M., Frøslev, T. G., Hansen, A. J., Heilmann-Clausen, J., Huang, Y., Larsen, J. C., Menger, J., Nayan, N. L. B. M., Pedersen, L. B., Richter, A. & 3 others, Dunn, Rob, Tøttrup, Anders P. & Bonn, A., 2022, In: Diversity and Distributions. 28, 6, p. 1242-1254

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. Published

      Fungi recognition: A practical use case

      Sulc, M., Picek, L., Matas, J., Jeppesen, T. S. & Heilmann-Clausen, Jacob, 2020, Proceedings - 2020 IEEE Winter Conference on Applications of Computer Vision, WACV 2020. Institute of Electrical and Electronics Engineers Inc., p. 2305-2313 9 p. 9093624. (Proceedings - 2020 IEEE Winter Conference on Applications of Computer Vision, WACV 2020).

      Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

    9. Published

      Pluteus insidiosus Complex, Four New Species Described and Pluteus reisneri Resurrected

      Sevcikova, H., Ferisin, G., Malysheva, E., Justo, A., Heilmann-Clausen, Jacob, Horak, E., Kalinina, L., Kaygusuz, O., Knudsen, H., Menolli, N., Moreau, P., Munoz Gonzalez, G., Saar, I., Türkekul, I. & Dovana, F., 2022, In: Journal of Fungi. 8, 6, 26 p., 623.

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      Pluteus dianae and P. punctatus resurrected, with first records from eastern and northern Europe

      Sevcikova, H., Malysheva, E. F., Justo, A., Heilmann-Clausen, Jacob & Tomsovsky, M., 2020, In: Mycotaxon. 135, 2, p. 245-274 30 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    11. Published

      Hvilke skove bør udlægges til natur?

      Rahbek, Carsten, Højgård Petersen, A., Bladt, J., Bruun, Hans Henrik, Ejrnæs, R. & Heilmann-Clausen, Jacob, 22 Jan 2018, In: Jyllands-Posten. p. 19 1 p.

      Research output: Contribution to journal › Contribution to newspaper - Feature article › Communication

    12. Published

      Automatic Fungi Recognition: Deep Learning Meets Mycology

      Picek, L., Šulc, M., Matas, J., Heilmann-Clausen, Jacob, Jeppesen, T. S. & Lind, E., 2022, In: Sensors. 22, 2, 22 p., 633.

      Research output: Contribution to journal › Journal article › Research › peer-review

    13. Published

      Overview of FungiCLEF 2022: Fungi Recognition as an Open Set Classification Problem

      Picek, L., Šulc, M., Matas, J. & Heilmann-Clausen, Jacob, 2022, In: CEUR Workshop Proceedings. 3180, p. 1970-1981 12 p.

      Research output: Contribution to journal › Conference article › Research › peer-review

    14. Published

      Danish Fungi 2020 - Not Just Another Image Recognition Dataset

      Picek, L., Sulc, M., Matas, J., Jeppesen, T. S., Heilmann-Clausen, Jacob, Læssøe, Thomas & Frøslev, Tobias Guldberg, 2022, Proceedings - 2022 IEEE Winter Conference on Applications of Computer Vision, WACV 2022. O'Conner, L. (ed.). IEEE, p. 3281-3291 11 p.

      Research output: Chapter in Book/Report/Conference proceeding › Article in proceedings › Research › peer-review

    15. Published

      Forfattere bag central skovrapport: Her er vores anbefalinger om urørt skov

      Petersen, Anders Højgård, Lundhede, Thomas, Heilmann-Clausen, Jacob, Thorsen, Bo Jellesmark, Strange, Niels & Rahbek, Carsten, 8 Mar 2022, Altinget.dk.

      Research output: Other contribution › Net publication - Internet publication › Communication

    16. Published

      Biologiske anbefalinger om udpegning af skov til biodiversitetsformål på statens arealer: Forskningsbaseret rådgivning fra Københavns og Aarhus Universiteter i forbindelse med regeringens Naturpakke

      Petersen, A. H., Bladt, J., Bruun, Hans Henrik, Ejrnæs, R., Heilmann-Clausen, Jacob & Rahbek, Carsten, 2017, København: Københavns Universitet. 40 p.

      Research output: Book/Report › Report › Commissioned

    17. Published

      Bevarelse af biodiversiteten i de danske skove

      Petersen, A. H., Lundhede, Thomas, Bruun, Hans Henrik, Heilmann-Clausen, Jacob, Thorsen, Bo Jellesmark, Strange, Niels & Rahbek, Carsten, 2016, In: Dansk Ornitologisk Forenings Tidsskrift. 109, p. 186-188 3 p.

      Research output: Contribution to journal › Journal article › Research

    18. Published

      Do plant-based biogeographical regions shape aphyllophoroid fungal communities in Europe?

      Ordynets, A., Heilmann-Clausen, Jacob, Savchenko, A., Bässler, C., Volobuev, S., Akulov, O., Karadelev, M., Kotiranta, H., Saitta, A., Langer, E. & Abrego, N., 2018, In: Journal of Biogeography. 45, 5, p. 1182-1195 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    19. Published

      Vurdering af bevaringsstatus for skov

      Nygaard, B., Bruun, Hans Henrik, Heilmann-Clausen, Jacob, Damgaard, C., Ejrnæs, R. & Nielsen, K. E., 22 Nov 2013, Aarhus Universitet. 24 p.

      Research output: Book/Report › Report › Commissioned

    20. Published

      Dynamik og forstyrrelser i skoven: svampe

      Møller, P. F., Thomsen, Iben Margrete & Heilmann-Clausen, Jacob, 2010, Naturen i Danmark: skovene. Sand-Jensen, K. & Møller, P. F. (eds.). Gyldendal, p. 290-295 6 p.

      Research output: Chapter in Book/Report/Conference proceeding › Book chapter › Communication

    21. Published

      Anbefalinger vedrørende omstilling og forvaltning af skov til biodiversitetsformål: Udarbejdet for Naturstyrelsen

      Møller, P. F., Heilmann-Clausen, Jacob, Johannsen, VK, Buttenschøn, Rita M., Schmidt, Inger Kappel, Rahbek, Carsten, Bruun, Hans Henrik & Ejrnæs, R., 2018, København: GEUS. 86 p. (Danmarks og Grønlands Geologiske Undersøgelse Rapport; No. 28, Vol. 2018).

      Research output: Book/Report › Report › Commissioned › peer-review

    22. Published

      First Evidence That Nematode Communities in Deadwood Are Related to Tree Species Identity and to Co-Occurring Fungi and Prokaryotes

      Moll, J., Roy, F., Bässler, C., Heilmann-Clausen, Jacob, Hofrichter, M., Kellner, H., Krabel, D., Schmidt, J. H., Buscot, F. & Hoppe, B., 2021, In: Microorganisms. 9, 7, 15 p., 1454.

      Research output: Contribution to journal › Journal article › Research › peer-review

    23. Published

      Connecting the multiple dimensions of global soil fungal diversity

      Mikryukov, V., Dulya, O., Zizka, A., Bahram, M., Hagh-Doust, N., Anslan, S., Prylutskyi, O., Delgado-Baquerizo, M., Maestre, F. T., Nilsson, H., Pärn, J., Öpik, M., Moora, M., Zobel, M., Espenberg, M., Mander, Ü., Khalid, A. N., Corrales, A., Agan, A., Vasco-Palacios, A-M. & 86 others, Saitta, A., Rinaldi, A., Verbeken, A., Sulistyo, B., Tamgnoue, B., Furneaux, B., Duarte Ritter, C., Nyamukondiwa, C., Sharp, C., Marín, C., Gohar, D., Klavina, D., Sharmah, D., Dai, D. Q., Nouhra, E., Biersma, Elisabeth M., Rähn, E., Cameron, E., De Crop, E., Otsing, E., Davydov, E., Albornoz, F., Brearley, F., Buegger, F., Zahn, G., Bonito, G., Hiiesalu, I., Barrio, I., Heilmann-Clausen, Jacob, Ankuda, J., Doležal, J., Kupagme, J., Maciá-Vicente, J., Fovo, J. D., Geml, J., Alatalo, J., Alvarez-Manjarrez, J., Põldmaa, K., Runnel, K., Adamson, K., Bråthen, K., Pritsch, K., Tchan Issifou, K., Armolaitis, K., Hyde, K., Newsham, K. K., Panksep, K., Lateef, A. A., Hansson, L., Lamit, L., Saba, M., Tuomi, M., Gryzenhout, M., Bauters, M., Piepenbring, M., Wijayawardene, N. N., Yorou, N., Kurina, O., Mortimer, P., Meidl, P., Kohout, P., Puusepp, R., Drenkhan, R., Garibay-Orijel, R., Godoy, R., Alkahtani, S., Rahimlou, S., Dudov, S., Põlme, S., Ghosh, S., Mundra, S., Ahmed, T., Netherway, T., Henkel, T., Roslin, T., Nteziryayo, V., Fedosov, V., Onipchenko, V., Yasanthika, W. A. E., Lim, Y., Van Nuland, M., Soudzilovskaia, N., Antonelli, A., Kõljalg, U., Abarenkov, K. & Tedersoo, L., 2023, In: Science Advances. 9, 48, 15 p., eadj8016.

      Research output: Contribution to journal › Journal article › Research › peer-review

    24. Published

      Dataset on species incidence, species richness and forest characteristics in a Danish protected area

      Mazziotta, A., Heilmann-Clausen, Jacob, Bruun, Hans Henrik, Fritz, Ö., Aude, E. & Tøttrup, Anders P., 2016, In: Data in Brief. 9, p. 895-897 3 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    25. Published

      Interaction type and intimacy structure networks between forest-dwelling organisms and their host trees

      Mazziotta, A., Vizentin-Bugoni, J., Tøttrup, Anders P., Bruun, Hans Henrik, Fritz, Ö. & Heilmann-Clausen, Jacob, Nov 2017, In: Basic and Applied Ecology. 24, p. 86-97 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

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    ID: 18506117