Jacob Heilmann-Clausen

Jacob Heilmann-Clausen

Associate Professor

Member of:


    1. 2024
    2. E-pub ahead of print

      The power of citizen science to advance fungal conservation

      Haelewaters, D., Quandt, C. A., Bartrop, L., Cazabonne, J., Crockatt, M. E., Cunha, S. P., De Lange, R., Dominici, L., Douglas, B., Drechsler-Santos, E. R., Heilmann-Clausen, Jacob, Irga, P. J., Jakob, S., Lofgren, L., Martin, T. E., Muchane, M. N., Stallman, J. K., Verbeken, A., Walker, A. K. & Gonçalves, S. C., 2024, (E-pub ahead of print) In: Conservation Letters. 13 p.

      Research output: Contribution to journalReviewResearchpeer-review

    3. 2023
    4. Published

      Symbiotic status alters fungal eco-evolutionary offspring trajectories

      Aguilar-Trigueros, C. A., Krah, F-S., Cornwell, W. K., Zanne, A. E., Abrego, N., Anderson, I. C., Andrew, C. J., Baldrian, P., Bässler, C., Bissett, A., Chaudhary, V. B., Chen, B., Chen, Y., Delgado-Baquerizo, M., Deveautour, C., Egidi, E., Flores-Moreno, H., Golan, J., Heilmann-Clausen, J., Hempel, S. & 14 others, Hu, Y., Kauserud, H., Kivlin, S. N., Kohout, P., Lammel, D. R., Maestre, F. T., Pringle, A., Purhonen, J., Singh, B. K., Veresoglou, S. D., Větrovský, T., Zhang, H., Rillig, M. C. & Powell, J. R., 2023, In: Ecology Letters. 26, 9, p. 1523-1534 12 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    5. Published

      Where are we now with European forest multi-taxon biodiversity and where can we head to?

      Burrascano, S., Chianucci, F., Trentanovi, G., Kepfer-Rojas, S., Sitzia, T., Tinya, F., Doerfler, I., Paillet, Y., Nagel, T. A., Mitic, B., Morillas, L., Munzi, S., Van der Sluis, T., Alterio, E., Balducci, L., de Andrade, R. B., Bouget, C., Giordani, P., Lachat, T., Matosevic, D. & 117 others, Napoleone, F., Nascimbene, J., Paniccia, C., Roth, N., Aszalós, R., Brazaitis, G., Cutini, A., D'Andrea, E., De Smedt, P., Heilmann-Clausen, Jacob, Janssen, P., Kozák, D., Mårell, A., Mikoláš, M., Nordén, B., Matula, R., Schall, P., Svoboda, M., Ujhazyova, M., Vandekerkhove, K., Wohlwend, M., Xystrakis, F., Aleffi, M., Ammer, C., Archaux, F., Asbeck, T., Avtzis, D., Ayasse, M., Bagella, S., Balestrieri, R., Barbati, A., Basile, M., Bergamini, A., Bertini, G., Biscaccianti, A. B., Boch, S., Bölöni, J., Bombi, P., Boscardin, Y., Brunialti, G., Bruun, Hans Henrik, Buscot, F., Byriel, David Bille, Campagnaro, T., Campanaro, A., Chauvat, M., Ciach, M., Čiliak, M., Cistrone, L., Pereira, J. M. C., Daniel, R., De Cinti, B., De Filippo, G., Dekoninck, W., Di Salvatore, U., Dumas, Y., Elek, Z., Ferretti, F., Fotakis, D., Frank, T., Frey, J., Giancola, C., Gomoryová, E., Gosselin, M., Gosselin, F., Gossner, M. M., Götmark, F., Haeler, E., Hansen, A. K., Hertzog, L., Hofmeister, J., Hošek, J., Johannsen, VK, Justesen, Mathias Just, Korboulewsky, N., Kovács, B., Lakatos, F., Landivar, C. M., Lens, L., Lingua, E., Lombardi, F., Máliš, F., Marchino, L., Marozas, V., Matteucci, G., Mattioli, W., Møller, P. F., Müller, J., Németh, C., Ónodi, G., Parisi, F., Perot, T., Perret, S., Persiani, A. M., Portaccio, A., Posillico, M., Preikša, Ž., Rahbek, Carsten, Rappa, N. J., Ravera, S., Romano, A., Samu, F., Scheidegger, C., Schmidt, Inger Kappel, Schwegmann, S., Sicuriello, F., Spinu, A. P., Spyroglou, G., Stillhard, J., Topalidou, E., Tøttrup, Anders P., Ujházy, K., Veres, K., Verheyen, K., Weisser, W. W., Zapponi, L. & Ódor, P., 2023, In: Biological Conservation. 284, 13 p., 110176.

      Research output: Contribution to journalReviewResearchpeer-review

    6. Published

      Connecting the multiple dimensions of global soil fungal diversity

      Mikryukov, V., Dulya, O., Zizka, A., Bahram, M., Hagh-Doust, N., Anslan, S., Prylutskyi, O., Delgado-Baquerizo, M., Maestre, F. T., Nilsson, H., Pärn, J., Öpik, M., Moora, M., Zobel, M., Espenberg, M., Mander, Ü., Khalid, A. N., Corrales, A., Agan, A., Vasco-Palacios, A-M. & 86 others, Saitta, A., Rinaldi, A., Verbeken, A., Sulistyo, B., Tamgnoue, B., Furneaux, B., Duarte Ritter, C., Nyamukondiwa, C., Sharp, C., Marín, C., Gohar, D., Klavina, D., Sharmah, D., Dai, D. Q., Nouhra, E., Biersma, Elisabeth M., Rähn, E., Cameron, E., De Crop, E., Otsing, E., Davydov, E., Albornoz, F., Brearley, F., Buegger, F., Zahn, G., Bonito, G., Hiiesalu, I., Barrio, I., Heilmann-Clausen, Jacob, Ankuda, J., Doležal, J., Kupagme, J., Maciá-Vicente, J., Fovo, J. D., Geml, J., Alatalo, J., Alvarez-Manjarrez, J., Põldmaa, K., Runnel, K., Adamson, K., Bråthen, K., Pritsch, K., Tchan Issifou, K., Armolaitis, K., Hyde, K., Newsham, K. K., Panksep, K., Lateef, A. A., Hansson, L., Lamit, L., Saba, M., Tuomi, M., Gryzenhout, M., Bauters, M., Piepenbring, M., Wijayawardene, N. N., Yorou, N., Kurina, O., Mortimer, P., Meidl, P., Kohout, P., Puusepp, R., Drenkhan, R., Garibay-Orijel, R., Godoy, R., Alkahtani, S., Rahimlou, S., Dudov, S., Põlme, S., Ghosh, S., Mundra, S., Ahmed, T., Netherway, T., Henkel, T., Roslin, T., Nteziryayo, V., Fedosov, V., Onipchenko, V., Yasanthika, W. A. E., Lim, Y., Van Nuland, M., Soudzilovskaia, N., Antonelli, A., Kõljalg, U., Abarenkov, K. & Tedersoo, L., 2023, In: Science Advances. 9, 48, 15 p., eadj8016.

      Research output: Contribution to journalJournal articleResearchpeer-review

    7. Published

      A synthesis of multi-taxa management experiments to guide forest biodiversity conservation in Europe

      Tinya, F., Doerfler, I., de Groot, M., Heilman-Clausen, J., Kovács, B., Mårell, A., Nordén, B., Aszalós, R., Bässler, C., Brazaitis, G., Burrascano, S., Camprodon, J., Chudomelová, M., Čížek, L., D'Andrea, E., Gossner, M., Halme, P., Hédl, R., Korboulewsky, N., Kouki, J. & 25 others, Kozel, P., Lõhmus, A., López, R., Máliš, F., Martín, J. A., Matteucci, G., Mattioli, W., Mundet, R., Müller, J., Nicolas, M., Oldén, A., Piqué, M., Preikša, Ž., Ciuró, J. R., Remm, L., Schall, P., Šebek, P., Seibold, S., Simončič, P., Ujházy, K., Ujházyová, M., Vild, O., Vincenot, L., Weisser, W. & Ódor, P., 2023, In: Global Ecology and Conservation. 46, 17 p., e02553.

      Research output: Contribution to journalReviewResearchpeer-review

    8. Published

      Words apart: Standardizing forestry terms and definitions across European biodiversity studies

      Trentanovi, G., Campagnaro, T., Sitzia, T., Chianucci, F., Vacchiano, G., Ammer, C., Ciach, M., Nagel, T. A., del Río, M., Paillet, Y., Munzi, S., Vandekerkhove, K., Bravo-Oviedo, A., Cutini, A., D'Andrea, E., De Smedt, P., Doerfler, I., Fotakis, D., Heilmann-Clausen, J., Hofmeister, J. & 19 others, Hošek, J., Janssen, P., Kepfer Rojas, Sebastian, Korboulewsky, N., Kovács, B., Kozák, D., Lachat, T., Mårell, A., Matula, R., Mikoláš, M., Nordén, B., Ódor, P., Perović, M., Pötzelsberger, E., Schall, P., Svoboda, M., Tinya, F., Ujházyová, M. & Burrascano, S., 2023, In: Forest Ecosystems. 10, 13 p., 100128.

      Research output: Contribution to journalJournal articleResearchpeer-review

    9. Published

      Holarctic Species in the Pluteus podospileus Clade: Description of Six New Species and Reassessment of Old Names

      Ševčíková, H., Malysheva, E. F., Antonín, V., Borovička, J., Dovana, F., Ferisin, G., Eyssartier, G., Grootmyers, D., Heilmann-Clausen, Jacob, Kalichman, J., Kaygusuz, O., Lebeuf, R., González, G. M., Minnis, A. M., Russell, S. D., Saar, I., Nielsen, Ida Broman, Frøslev, Tobias Guldberg & Justo, A., 2023, In: Journal of Fungi. 9, 9, 55 p., 898.

      Research output: Contribution to journalJournal articleResearchpeer-review

    10. 2022
    11. Published

      Traits and phylogenies modulate the environmental responses of wood-inhabiting fungal communities across spatial scales

      Abrego, N., Bässler, C., Christensen, M. & Heilmann-Clausen, Jacob, 2022, In: Journal of Ecology. 110, 4, p. 784-798 15 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    12. Published

      Naturpligt skal sikre mere og vildere natur i Danmark

      Baaner, Lasse, Bruun, Hans Henrik, Vejre, Henrik, Møller, Peter Rask, Båstrup-Spohr, Lars, Krøijer, Stine, Larsen, K. C., Kjøller, Rasmus, Strange, Niels, Jepsen, Martin Rudbeck & Heilmann-Clausen, Jacob, 3 Jun 2022, Altinget.dk.

      Research output: Other contributionNet publication - Internet publicationCommunication

    13. Published

      Simple attributes predict the value of plants as hosts to fungal and arthropod communities

      Bruun, Hans Henrik, Brunbjerg, A. K., Dalby, L., Fløjgaard, C., Frøslev, Tobias Guldberg, Haarder, S., Heilmann-Clausen, Jacob, Høye, T. T., Læssøe, Thomas & Ejrnæs, R., 2022, In: Oikos. 2022, 4, 11 p., e08823.

      Research output: Contribution to journalJournal articleResearchpeer-review

    14. Published

      Handbook of field sampling for multi-taxon biodiversity studies in European forests

      Burrascano, S., Trentanovi, G., Paillet, Y., Heilmann-Clausen, J., Giordani, P., Bagella, S., Campagnaro, T., Campanaro, A., Chianucci, F., De Smedt, P., García-Mijangos, I., Matošević, D., Sitzia, T., Doerfler, I., Hofmeister, J., Kepfer Rojas, S., Lõhmus, A., Munzi, S., Runnel, K., Tinya, F. & 27 others, Vandekerkhove, K., van der Sluis, T., Odor, P., Balducci, L., Bravo-Oviedo, A., Aszalós, R., Brazaitis, G., Andrea, C., D'Andrea, E., Hošek, J., Janssen, P., Korboulewsky, N., Kozák, D., Lachat, T., Lopez, R., Mårell, A., Matula, R., Mikoláš, M., Nordén, B., Popov, S., Pärtel, M., Penner, J., Schall, P., Svoboda, M., Ujházyová, M., Verheyen, K. & Xystrakis, F., 2022, COST (European Cooperation in Science and Technology). 110 p.

      Research output: Book/ReportBookResearchpeer-review

    15. Published

      European mushroom assemblages are phylogenetically structured by temperature

      Bässler, C., Heilmann-Clausen, Jacob, Andrew, C., Boddy, L., Büntgen, U., Diez, J., Heegaard, E., Egli, S., Gange, A. C., Halvorsen, R., Kauserud, H., Kirk, P. M., Krisai-Greilhuber, I., Kuyper, T. W., Nordén, J., Senn-Irlet, B. & Krah, F., 2022, In: Ecography. 2022, 11, 12 p., e06206.

      Research output: Contribution to journalJournal articleResearchpeer-review

    16. Published

      Distance decay 2.0 – A global synthesis of taxonomic and functional turnover in ecological communities

      Graco-Roza, C., Aarnio, S., Abrego, N., Acosta, A. T. R., Alahuhta, J., Altman, J., Angiolini, C., Aroviita, J., Attorre, F., Baastrup-Spohr, L., Barrera-Alba, J. J., Belmaker, J., Biurrun, I., Bonari, G., Bruelheide, H., Burrascano, S., Carboni, M., Cardoso, P., Carvalho, J. C., Castaldelli, G. & 72 others, Christensen, M., Correa, G., Dembicz, I., Dengler, J., Dolezal, J., Domingos, P., Erös, T., Ferreira, C. E. L., Filibeck, G., Floeter, S. R., Friedlander, A. M., Gammal, J., Gavioli, A., Gossner, M. M., Granot, I., Guarino, R., Gustafsson, C., Hayden, B., He, S., Heilmann-Clausen, Jacob, Heino, J., Hunter, J. T., Huszar, V. L. M., Janišová, M., Jyrkänkallio-Mikkola, J., Kahilainen, K. K., Kemppinen, J., Kozub, Ł., Kruk, C., Kulbiki, M., Kuzemko, A., Christiaan le Roux, P., Lehikoinen, A., Teixeira de Lima, D., Lopez-Urrutia, A., Lukács, B. A., Luoto, M., Mammola, S., Marinho, M. M., Menezes, L. S., Milardi, M., Miranda, M., Moser, G. A. O., Mueller, J., Niittynen, P., Norkko, A., Nowak, A., Ometto, J. P., Ovaskainen, O., Overbeck, G. E., Pacheco, F. S., Pajunen, V., Palpurina, S., Picazo, F., Campos, J. A., Rodil, I. F., Sabatini, F. M., Salingré, S., De Sanctis, M., Segura, A. M., da Silva, L. H. S., Stevanovic, Z. D., Swacha, G., Teittinen, A., Tolonen, K. T., Tsiripidis, I., Virta, L., Wang, B., Wang, J., Weisser, W., Xu, Y. & Soininen, J., 2022, In: Global Ecology and Biogeography. 31, 7, p. 1399-1421 23 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    17. Published

      Nyt fra Svampeatlas

      Heilmann-Clausen, Jacob, Læssøe, Thomas, Frøslev, Tobias Guldberg, Petersen, J. H., Jeppesen, T. S. & Søchting, Ulrik, 2022, In: Svampe. 85, p. 19-27

      Research output: Contribution to journalJournal articleCommunication

    18. Published

      Forfattere bag central skovrapport: Her er vores anbefalinger om urørt skov

      Petersen, Anders Højgård, Lundhede, Thomas, Heilmann-Clausen, Jacob, Thorsen, Bo Jellesmark, Strange, Niels & Rahbek, Carsten, 8 Mar 2022, Altinget.dk.

      Research output: Other contributionNet publication - Internet publicationCommunication

    19. Published

      Danish Fungi 2020 - Not Just Another Image Recognition Dataset

      Picek, L., Sulc, M., Matas, J., Jeppesen, T. S., Heilmann-Clausen, Jacob, Læssøe, Thomas & Frøslev, Tobias Guldberg, 2022, Proceedings - 2022 IEEE Winter Conference on Applications of Computer Vision, WACV 2022. O'Conner, L. (ed.). IEEE, p. 3281-3291 11 p.

      Research output: Chapter in Book/Report/Conference proceedingArticle in proceedingsResearchpeer-review

    20. Published

      Automatic Fungi Recognition: Deep Learning Meets Mycology

      Picek, L., Šulc, M., Matas, J., Heilmann-Clausen, Jacob, Jeppesen, T. S. & Lind, E., 2022, In: Sensors. 22, 2, 22 p., 633.

      Research output: Contribution to journalJournal articleResearchpeer-review

    21. Published

      Overview of FungiCLEF 2022: Fungi Recognition as an Open Set Classification Problem

      Picek, L., Šulc, M., Matas, J. & Heilmann-Clausen, Jacob, 2022, In: CEUR Workshop Proceedings. 3180, p. 1970-1981 12 p.

      Research output: Contribution to journalConference articleResearchpeer-review

    22. Published

      Pluteus insidiosus Complex, Four New Species Described and Pluteus reisneri Resurrected

      Sevcikova, H., Ferisin, G., Malysheva, E., Justo, A., Heilmann-Clausen, Jacob, Horak, E., Kalinina, L., Kaygusuz, O., Knudsen, H., Menolli, N., Moreau, P., Munoz Gonzalez, G., Saar, I., Türkekul, I. & Dovana, F., 2022, In: Journal of Fungi. 8, 6, 26 p., 623.

      Research output: Contribution to journalJournal articleResearchpeer-review

    23. Published

      Flying insect biomass is negatively associated with urban cover in surrounding landscapes

      Svenningsen, C. S., Bowler, D. E., Hecker, S., Bladt, J., Grescho, V., van Dam, N. M., Dauber, J., Eichenberg, D., Ejrnæs, R., Fløjgaard, C., Frenzel, M., Frøslev, T. G., Hansen, A. J., Heilmann-Clausen, J., Huang, Y., Larsen, J. C., Menger, J., Nayan, N. L. B. M., Pedersen, L. B., Richter, A. & 3 others, Dunn, Rob, Tøttrup, Anders P. & Bonn, A., 2022, In: Diversity and Distributions. 28, 6, p. 1242-1254

      Research output: Contribution to journalJournal articleResearchpeer-review

    24. Published

      Global patterns in endemicity and vulnerability of soil fungi

      Tedersoo, L., Mikryukov, V., Zizka, A., Bahram, M., Hagh-Doust, N., Anslan, S., Prylutskyi, O., Delgado-Baquerizo, M., Maestre, F. T., Pärn, J., Öpik, M., Moora, M., Zobel, M., Espenberg, M., Mander, Ü., Khalid, A. N., Corrales, A., Agan, A., Vasco-Palacios, A-M., Saitta, A. & 84 others, Rinaldi, A. C., Verbeken, A., Sulistyo, B. P., Tamgnoue, B., Furneaux, B., Ritter, C. D., Nyamukondiwa, C., Sharp, C., Marín, C., Gohar, D., Klavina, D., Sharmah, D., Dai, D. Q., Nouhra, E., Biersma, Elisabeth M., Rähn, E., Cameron, E. K., De Crop, E., Otsing, E., Davydov, E. A., Albornoz, F. E., Brearley, F. Q., Buegger, F., Zahn, G., Bonito, G., Hiiesalu, I., Barrio, I. C., Heilmann-Clausen, Jacob, Ankuda, J., Kupagme, J. Y., Maciá-Vicente, J. G., Fovo, J. D., Geml, J., Alatalo, J. M., Alvarez-Manjarrez, J., Põldmaa, K., Runnel, K., Adamson, K., Bråthen, K. A., Pritsch, K., Tchan, K. I., Armolaitis, K., Hyde, K. D., Newsham, K. K., Panksep, K., Lateef, A. A., Tiirmann, L., Hansson, L., Lamit, L. J., Saba, M., Tuomi, M., Gryzenhout, M., Bauters, M., Piepenbring, M., Wijayawardene, N., Yorou, N. S., Kurina, O., Mortimer, P. E., Meidl, P., Kohout, P., Nilsson, R. H., Puusepp, R., Drenkhan, R., Garibay-Orijel, R., Godoy, R., Alkahtani, S., Rahimlou, S., Dudov, S. V., Põlme, S., Ghosh, S., Mundra, S., Ahmed, T., Netherway, T., Henkel, T. W., Roslin, T., Nteziryayo, V., Fedosov, V. E., Onipchenko, V. G., Yasanthika, W. A. E., Lim, Y. W., Soudzilovskaia, N. A., Antonelli, A., Kõljalg, U. & Abarenkov, K., 2022, In: Global Change Biology. 28, 22, p. 6696-6710 15 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    25. 2021
    26. Published

      What is unmanaged forest and how does it sustain biodiversity in landscapes with a long history of intensive forestry?

      Bruun, Hans Henrik & Heilmann-Clausen, Jacob, 2021, In: Journal of Applied Ecology. 58, 9, p. 1813-1816 4 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    27. Published

      Handbook of field sampling for multi-taxon biodiversity studies in European forests

      Burrascano, S., Trentanovi, G., Paillet, Y., Heilmann-Clausen, J., Giordani, P., Bagella, S., Bravo-Oviedo, A., Campagnaro, T., Campanaro, A., Francesco, C., De Smedt, P., Itziar, G. M., Matošević, D., Sitzia, T., Aszalós, R., Brazaitis, G., Andrea, C., Ettore, DA. A., Doerfler, I., Hofmeister, J. & 24 others, Hošek, J., Janssen, P., Kepfer Rojas, Sebastian, Korboulewsky, N., Kozák, D., Lachat, T., Lõhmus, A., Lopez, R., Mårell, A., Matula, R., Mikoláš, M., Munzi, S., Nordén, B., Pärtel, M., Penner, J., Runnel, K., Schall, P., Svoboda, M., Tinya, F., Ujházyová, M., Vandekerkhove, K., Verheyen, K., Xystrakis, F. & Ódor, P., 2021, In: Ecological Indicators. 132, 13 p., 108266.

      Research output: Contribution to journalReviewResearchpeer-review

    28. Published

      Molecular biogeography of the fungus-dwelling saproxylic beetle Bolitophagus reticulatus indicates rapid expansion from glacial refugia

      Eberle, J., Husemann, M., Doerfler, I., Ulrich, W., Müller, J., Bouget, C., Brin, A., Gossner, M. M., Heilmann-Clausen, Jacob, Isacsson, G., Krištín, A., Lachat, T., Larrieu, L., Rigling, A., Schmidl, J., Seibold, S., Vandekerkhove, K. & Habel, J. C., 2021, In: Biological Journal of the Linnean Society. 133, 3, p. 766-778 13 p.

      Research output: Contribution to journalJournal articleResearchpeer-review

    29. Published

      First Evidence That Nematode Communities in Deadwood Are Related to Tree Species Identity and to Co-Occurring Fungi and Prokaryotes

      Moll, J., Roy, F., Bässler, C., Heilmann-Clausen, Jacob, Hofrichter, M., Kellner, H., Krabel, D., Schmidt, J. H., Buscot, F. & Hoppe, B., 2021, In: Microorganisms. 9, 7, 15 p., 1454.

      Research output: Contribution to journalJournal articleResearchpeer-review

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    ID: 18506117