thw266 KU
Professor, Affiliate Professor
- 2024
- Published
Identification of constrained sequence elements across 239 primate genomes
Kuderna, L. F. K., Ulirsch, J. C., Rashid, S., Ameen, M., Sundaram, L., Hickey, G., Cox, A. J., Gao, H., Kumar, A., Aguet, F., Christmas, M. J., Clawson, H., Haeussler, M., Janiak, M. C., Kuhlwilm, M., Orkin, J. D., Bataillon, T., Manu, S., Valenzuela, A., Bergman, J. & 72 others, , 2024, In: Nature. 625, p. 735–742 8 p.Research output: Contribution to journal › Journal article › peer-review
- 2023
- Published
A global catalog of whole-genome diversity from 233 primate species
Kuderna, L. F. K., Gao, H., Janiak, M. C., Kuhlwilm, M., Orkin, J. D., Bataillon, T., Manu, S., Valenzuela, A., Bergman, J., Rousselle, M., Silva, F. E., Agueda, L., Blanc, J., Gut, M., de Vries, D., Goodhead, I., Harris, R. A., Raveendran, M., Jensen, A., Chuma, I. S. & 55 others, , 2023, In: Science (New York, N.Y.). 380, 6648, p. 906-913 8 p.Research output: Contribution to journal › Journal article › peer-review
- Published
Comparative genomics reveals the hybrid origin of a macaque group
Zhang, B. L., Chen, W., Wang, Z., Pang, W., Luo, M. T., Wang, S., Shao, Y., He, W. Q., Deng, Y., Zhou, L., Chen, J., Yang, M. M., Wu, Y., Wang, L., Fernández-Bellon, H., Molloy, S., Meunier, H., Wanert, F., Kuderna, L., Marques-Bonet, T. & 10 others, , 2023, In: Science Advances. 9, 22, 13 p.Research output: Contribution to journal › Journal article › peer-review
- Published
Eighty million years of rapid evolution of the primate Y chromosome
Zhou, Y., Zhan, X., Jin, J., Zhou, L., Bergman, J., Li, X., Rousselle, M. M. C., Belles, M. R., Zhao, L., Fang, M., Chen, J., Fang, Q., Kuderna, L., Marques-Bonet, T., Kitayama, H., Hayakawa, T., Yao, Y. G., Yang, H., Cooper, D. N., Qi, X. & 3 others, , 2023, In: Nature Ecology and Evolution. 7, 20 p.Research output: Contribution to journal › Journal article › peer-review
- Published
Evolution of the germline mutation rate across vertebrates
Bergeron, Lucie Adrienne, Besenbacher, S., Zheng, J., Li, P., Bertelsen, Mads Frost, Quintard, B., Hoffman, J. I., Li, Z., Leger, J. S., Shao, C., Stiller, Josefin, Gilbert, M Thomas P, Schierup, M. H. & KU, thw266, 2023, In: Nature. 615, p. 285-291Research output: Contribution to journal › Journal article › peer-review
- Published
Harvesting the fruits of the first stage of the Primate Genome Project
Guo, Y. T., Shao, Y., Bi, X., Zhang, B. L., Wu, H., Zhou, Y., Li, M. L., Yu, L., KU, thw266, Wu, D. D. & Qi, X. G., 2023, In: Zoological research. 44, 4, p. 725-728 4 p.Research output: Contribution to journal › Journal article › peer-review
- Published
Historic Sampling of a Vanishing Beast: Population Structure and Diversity in the Black Rhinoceros
Sánchez-Barreiro, F., Westbury, Binia De Cahsan, Westbury, Michael Vincent, Sun, Xin, Margaryan, Ashot, Fontsere, Claudia, Bruford, M. W., Russo, I. M., Kalthoff, D. C., Sicheritz-Pontén, Thomas, Petersen, Bent, Dalén, L., KU, thw266, Marquès-Bonet, T., Gilbert, M Thomas P & Moodley, Y., 2023, In: Molecular Biology and Evolution. 40, 9, 19 p., msad180.Research output: Contribution to journal › Journal article › peer-review
- Published
How genomics can help biodiversity conservation
The European Reference Genome Atlas Consortium, T. E. R. G. A. C., 2023, In: Trends in Genetics. 39, 7, 15 p.Research output: Contribution to journal › Review › peer-review
- Published
Lineage-specific accelerated sequences underlying primate evolution
Bi, X., Zhou, L., Zhang, J., Feng, S., Hu, M., Cooper, D. N., Lin, J., Li, J., Wu, D. & KU, thw266, 2023, In: Science Advances. 9, 22, 12 p., eadc9507.Research output: Contribution to journal › Journal article › peer-review
- Published
On the origin and evolution of RNA editing in metazoans
Zhang, P., Zhu, Y., Guo, Q., Li, J., Zhan, X., Yu, H., Xie, N., Tan, H., Lundholm, Nina, Garcia-Cuetos, L., Martin, M. D., Subirats, M. A., Su, Y., Ruiz-Trillo, I., Martindale, M. Q., Yu, J., Gilbert, M Thomas P, KU, thw266 & Li, Q., 2023, In: Cell Reports. 42, 2, 22 p., 112112.Research output: Contribution to journal › Journal article › peer-review
- Published
Parallel evolution of fish bi-modal breathing and expansion of olfactory receptor (OR) genes: toward a universal ORs nomenclature
Silva, L., Mendes, T., Ramos, L., KU, thw266 & Antunes, A., 2023, In: Journal of Genetics and Genomics. 50, 8, 11 p.Research output: Contribution to journal › Journal article › peer-review
- Published
Pervasive incomplete lineage sorting illuminates speciation and selection in primates
Rivas-González, I., Rousselle, M., Li, F., Zhou, L., Dutheil, J. Y., Munch, K., Shao, Y., Wu, D., Schierup, M. H. & KU, thw266, 2023, In: Science (New York, N.Y.). 380, 6648, 10 p.Research output: Contribution to journal › Journal article › peer-review
- Published
Phylogenomic analyses provide insights into primate evolution
Shao, Y., Zhou, L., Li, F., Zhao, L., Zhang, B. L., Shao, F., Chen, J. W., Chen, C. Y., Bi, X., Zhuang, X. L., Zhu, H. L., Hu, J., Sun, Z., Li, X., Wang, D., Rivas-González, I., Wang, S., Wang, Y. M., Chen, W., Li, G. & 23 others, , 2023, In: Science (New York, N.Y.). 380, 6648, p. 913-924 12 p.Research output: Contribution to journal › Journal article › peer-review
- Published
Species-specific traits mediate avian demographic responses under past climate change
Germain, Ryan Ross, Feng, S., Chen, G., Graves, G. R., Tobias, J. A., Rahbek, Carsten, Lei, F., Fjeldså, Jon, Hosner, Peter Andrew, Gilbert, M Thomas P, KU, thw266 & Nogues, David Bravo, 2023, In: Nature Ecology and Evolution. 7, 6, p. 862-872 11 p.Research output: Contribution to journal › Journal article › peer-review
- Published
The enormous repetitive Antarctic krill genome reveals environmental adaptations and population insights
Shao, C., Sun, S., Liu, K., Wang, J., Li, S., Liu, Q., Deagle, B. E., Seim, I., Biscontin, A., Wang, Q., Liu, X., Kawaguchi, S., Liu, Y., Jarman, S., Wang, Y., Wang, H. Y., Huang, G., Hu, J., Feng, B., De Pittà, C. & 29 others, , 2023, In: Cell. 186, 6, p. 1279-1294.e19 36 p.Research output: Contribution to journal › Journal article › peer-review
- Published
The landscape of tolerated genetic variation in humans and primates
Gao, H., Hamp, T., Ede, J., Schraiber, J. G., McRae, J., Singer-Berk, M., Yang, Y., Dietrich, A. S. D., Fiziev, P. P., Kuderna, L. F. K., Sundaram, L., Wu, Y., Adhikari, A., Field, Y., Chen, C., Batzoglou, S., Aguet, F., Lemire, G., Reimers, R., Balick, D. & 77 others, , 2023, In: Science (New York, N.Y.). 380, 6648, 13 p.Research output: Contribution to journal › Journal article › peer-review
- 2022
- Published
A complete, telomere-to-telomere human genome sequence presents new opportunities for evolutionary genomics
Mao, Y. & KU, thw266, 2022, In: Nature Methods. 19, 6, p. 635-638 4 p.Research output: Contribution to journal › Comment/debate › peer-review
- Published
A haplotype-resolved genome assembly of the Nile rat facilitates exploration of the genetic basis of diabetes
Toh, H., Yang, C., Formenti, G., Raja, K., Yan, L., Tracey, A., Chow, W., Howe, K., Bergeron, L. A., Zhang, G., Haase, B., Mountcastle, J., Fedrigo, O., Fogg, J., Kirilenko, B., Munegowda, C., Hiller, M., Jain, A., Kihara, D., Rhie, A. & 9 others, , 2022, In: BMC Biology. 20, 21 p., 245.Research output: Contribution to journal › Journal article › peer-review
- Published
A single-cell transcriptomic atlas tracking the neural basis of division of labour in an ant superorganism
Li, Q., Wang, M., Zhang, P., Liu, Y., Guo, Q., Zhu, Y., Wen, T., Dai, X., Zhang, X., Nagel, M., Dethlefsen, B. H., Xie, N., Zhao, J., Jiang, W., Han, L., Wu, L., Zhong, W., Wang, Z., Wei, X., Dai, W. & 9 others, , 2022, In: Nature Ecology & Evolution. 6, 8, p. 1191-1204Research output: Contribution to journal › Journal article › peer-review
- Published
Adaptation and Cryptic Pseudogenization in Penguin Toll-Like Receptors
Fiddaman, S. R., Vinkler, M., Spiro, S. G., Levy, H., Emerling, C. A., Boyd, A. C., Dimopoulos, E. A., Vianna, J. A., Cole, T. L., Pan, H., Fang, M., KU, thw266, Hart, T., Frantz, L. A. F. & Smith, A. L., 2022, In: Molecular Biology and Evolution. 39, 1, 17 p., msab354.Research output: Contribution to journal › Journal article › peer-review
- Published
Ancient proteins resolve controversy over the identity of Genyornis eggshell
Demarchi, B., Stiller, Josefin, Grealy, A., Mackie, Meaghan, Deng, Y., Gilbert, M Thomas P, Clarke, J., Legendre, L. J., Boano, R., Sicheritz-Pontén, Thomas, Magee, J., KU, thw266, Bunce, M., Collins, Matthew James & Miller, G., 2022, In: PNAS. 119, 43, 9 p., e2109326119.Research output: Contribution to journal › Journal article › peer-review
- Published
Canalized gene expression during development mediates caste differentiation in ants
Qiu, Bitao, Dai, X., Li, P., Larsen, Rasmus Stenbak, Li, Ruyan, Price, A. L., Ding, G., Texada, Michael James, Zhang, X., Zuo, D., Gao, Q., Jiang, W., Wen, T., Pontieri, L., Guo, C., Rewitz, Kim, Li, Q., Liu, W., Boomsma, Jacobus J. & KU, thw266, 2022, In: Nature Ecology and Evolution. 6, 11, p. 1753-1765Research output: Contribution to journal › Journal article › peer-review
- Published
Comparative phylogeography study reveals introgression and incomplete lineage sorting during rapid diversification of Rhodiola
You, J., Lougheed, S. C., Zhao, Y., KU, thw266, Liu, W., Lu, F., Wang, Y., Zhang, W., Yang, J., Qiong, L. & Song, Z., 2022, In: Annals of Botany. 129, 2, p. 185-200 16 p.Research output: Contribution to journal › Journal article › peer-review
- Published
Conservation genomics of the endangered Seychelles Magpie-Robin (Copsychus sechellarum): a unique insight into the history of a precious endemic bird
Cavill, E. L., Gopalakrishnan, Shyam, Puetz, Lara Christine, Ribeiro, Â. M., Mak, Sarah Siu Tze, Rodrigues da Fonseca, Rute Andreia, Antunes Pacheco, George, Dunlop, B., Accouche, W., Shah, N., Zora, A., Calabrese, L., Genner, M., Jones, G., Guo, C., KU, thw266 & Gilbert, M Thomas P, 2022, In: Ibis. 164, 2, p. 396-410 15 p.Research output: Contribution to journal › Journal article › peer-review
- Published
Draft genome assemblies of four manakins
Li, X., Gao, R., Chen, G., Price, A. L., Øksnebjerg, D. B., Hosner, Peter Andrew, Zhou, Y., KU, thw266 & Feng, S., 2022, In: Scientific Data. 9, 11 p., 564.Research output: Contribution to journal › Journal article › peer-review
ID: 40294134
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3206
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Molecular traces of alternative social organization in a termite genome
Research output: Contribution to journal › Journal article › peer-review
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3122
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Caste-specific RNA editomes in the leaf-cutting ant Acromyrmex echinatior
Research output: Contribution to journal › Journal article › peer-review
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2705
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Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment
Research output: Contribution to journal › Journal article › peer-review
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