Dennis Sandris Nielsen
Dennis Sandris Nielsen

Professor with special responsibilities

  • Microbiology and Fermentation

    Rolighedsvej 26, 1958 Frederiksberg C, Fødevarebygningen, Building: 85-4-H434

    Phone: +45 35 33 32 87Mobile: +45 51 33 03 62

  1. 2020
  2. E-pub ahead of print

    Nutrient Restriction has Limited Short-Term Effects on Gut, Immunity, and Brain Development in Preterm Pigs

    Ahnfeldt, Agnethe May, Bæk, Ole, Hui, Yan, Nielsen, Charlotte Holme, Obelitz-Ryom, Karina, Busk-Anderson, T., Ruge, A., Holst, Jens Juul, Rudloff, S., Burrin, D., Nguyen, Duc Ninh, Nielsen, Dennis Sandris, Zachariassen, G., Bering, Stine Brandt, Thymann, Thomas & Sangild, Per Torp, 18 Feb 2020, In : The Journal of Nutrition. 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. E-pub ahead of print
  4. Accepted/In press

    Restitution of gut microbiota in Ugandan children administered with probiotics (Lactobacillus rhamnosus GG and Bifidobacterium animalis subsp. lactis BB-12) during treatment for severe acute malnutrition

    Castro Mejia, Josue Leonardo, O’Ferrall, S., Krych, Lukasz, O’Mahony, E., Namusoke, H., Lanyero, B., Kot, Witold, Nabukeera-Barungi, N., Michaelsen, Kim F., Mølgaard, Christian, Friis, Henrik, Grenov, Benedikte & Nielsen, Dennis Sandris, 1 Jan 2020, (Accepted/In press) In : Gut Microbes. 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. Published

    Lactobacillus rhamnosus GG Genomic and Phenotypic Stability in an Industrial Production Process

    Strickertsson, Marianne Stage, Wichmann, A., Jørgensen, M., Vera-Jimenéz, N. I., Wielje, M., Nielsen, Dennis Sandris, Sandelin, Albin Gustav, Chen, Y. & Baker, A., 2020, In : Applied and Environmental Microbiology. 86, 6, 15 p., e02780-19.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    Dietary Inulin and Trichuris suis Infection Promote Beneficial Bacteria Throughout the Porcine Gut

    Stolzenbach, Sophie, Myhill, Laura J., Andersen, L. O., Krych, Lukasz, Mejer, Helena, Williams, Andrew Richard, Nejsum, P., Stensvold, C. R., Nielsen, Dennis Sandris & Thamsborg, Stig Milan, 2020, In : Frontiers in Microbiology. 11, 15 p., 312.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Impact of Dietary Supplementation of Lactic Acid Bacteria Fermented Rapeseed with or without Macroalgae on Performance and Health of Piglets Following Omission of Medicinal Zinc from Weaner Diets

    Satessa, Gizaw Dabessa, Tamez-Hidalgo , P., Hui, Yan, Cieplak, T., Krych, Lukasz, Kjærulff , S., Brunsgaard , G., Nielsen, Dennis Sandris & Nielsen, M. O., 2020, In : Animals. 10, 1, 137.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    Microbiota in foods from Inuit traditional hunting

    Hauptmann, A. L., Paulová, P., Hansen, Lars Hestbjerg, Sicheritz-Pontén, Thomas, Mulvad, G. & Nielsen, Dennis Sandris, 2020, In : PLoS ONE. 15, 1, 15 p., e0227819.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published
  10. Published

    The microbial composition of dried fish prepared according to Greenlandic Inuit traditions and industrial counterparts

    Hauptmann, A. L., Paulová, P., Castro Mejia, Josue Leonardo, Hansen, L. H., Sicheritz-Pontén, Thomas, Mulvad, G. & Nielsen, Dennis Sandris, 2020, In : Food Microbiology. 85, 11 p., 103305.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Virulent coliphages in 1-year-old children fecal samples are fewer, but more infectious than temperate coliphages

    Mathieu, A., Dion, M., Deng, Ling, Tremblay, D., Moncaut, E., Shah, S. A., Stokholm, J., Krogfelt, K. A., Schjørring, S., Bisgaard, Hans, Nielsen, Dennis Sandris, Moineau, S. & Petit, M., 2020, In : Nature Communications. 11, 12 p., 378.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. 2019
  13. Published

    Editorial: Microbial food and feed ingredients - reconciling tradition and novelty

    Hansen, E. B., Nielsen, Dennis Sandris & LaPointe, G., 1 Jun 2019, In : FEMS Microbiology Letters. 366, 11, 2 p., fnz130.

    Research output: Contribution to journalEditorialResearchpeer-review

  14. Published
  15. Published

    A Protocol for Extraction of Infective Viromes Suitable for Metagenomics Sequencing from Low Volume Fecal Samples

    Deng, Ling, Silins, R., Castro Mejia, Josue Leonardo, Kot, W., Jessen, L., Thorsen, J., Shah, S., Stokholm, J., Bisgaard, Hans, Moineau, S. & Nielsen, Dennis Sandris, 2019, In : Viruses. 11, 7, 10 p., 667.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Bacterial species to be considered in quality assurance of mice and rats

    Hansen, Axel Kornerup, Nielsen, Dennis Sandris, Krych, Lukasz & Hansen, Camilla Hartmann Friis, 2019, In : Laboratory Animals. 53, 3, p. 281-291

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. Published

    Cesarean Section Induces Microbiota-Regulated Immune Disturbances in C57BL/6 Mice

    Fisker, Line, Krych, Lukasz, Rasmussen, S. H., Nielsen, Dennis Sandris, Kot, W., Holm, T. L., Hansen, Axel Kornerup & Hansen, Camilla Hartmann Friis, 2019, In : Journal of Immunology. 202, 1, p. 142-150

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Cesarean section increases sensitivity to oxazolone-induced colitis in C57BL/6 mice

    Fisker, Line, Hansen, Axel Kornerup, Krych, Lukasz, Nielsen, Dennis Sandris, Holm, T. L., Tougaard, P. & Hansen, Camilla Hartmann Friis, 2019, In : Mucosal Immunology. 12, 6, p. 1348-1357 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Correlates of gut function in children hospitalized for severe acute malnutrition, a cross-sectional study in Uganda

    Lanyero, B., Grenov, Benedikte, Barungi, N. N., Namusoke, H., Michaelsen, Kim F., Mupere, E., Mølgaard, Christian, Jiang, P., Frøkiær, Hanne, Wiese, M., Muhammed, Musemma Kedir, Pesu, Hannah, Nielsen, Dennis Sandris, Friis, Henrik, Rytter, M. J. H. & Christensen, V. B., 2019, In : Journal of Pediatric Gastroenterology and Nutrition. 69, 3, p. 292-298 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    DNA enrichment and tagmentation method for species-level identification and strain-level differentiation using ON-rep-seq

    Krych, Lukasz, Castro Mejia, Josue Leonardo, Forero-Junco, L. M., Moesby, D. N., Mikkelsen, M. B., Rasmussen, Morten Arendt, Sykulski, M. & Nielsen, Dennis Sandris, 2019, In : Communications Biology. 2, 10 p., 369.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Dark chocolate as a stable carrier of microencapsulated Akkermansia muciniphila and Lactobacillus casei

    Marcial-Coba, M. S., Saaby, L., Knøchel, Susanne & Nielsen, Dennis Sandris, 2019, In : FEMS Microbiology Letters. 366, 2, p. 1-6 fny290.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Development of the equine gut microbiota

    Lindenberg, F., Krych, Lukasz, Kot, Witold, Fielden, J., Frøkiær, Hanne, van Galen, G., Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2019, In : Scientific Reports. 9, 1, 9 p., 14427.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Draft Genome Sequence of Streptococcus anginosus Strain CALM001, Isolated from the Gut of an Elderly Dane

    Ahmad, H. F., Schreiber, L., Marshall, I. P. G., Andersen, P. J., Castro Mejia, Josue Leonardo & Nielsen, Dennis Sandris, 2019, In : Microbiology resource announcements. 8, 24, 2 p., e00379-19.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Dried date paste as carrier of the proposed probiotic Bacillus coagulans BC4 and viability assessment during storage and simulated gastric passage

    Marcial-Coba, M. S., Pjaca, A. S., Andersen, C. J., Knøchel, Susanne & Nielsen, Dennis Sandris, 2019, In : Lebensmittel - Wissenschaft und Technologie. 99, p. 197-201

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published
  26. Published

    Expression of immune regulatory genes correlate with the abundance of specific Clostridiales and Verrucomicrobia species in the equine ileum and cecum

    Lindenberg, F., Krych, Lukasz, Fielden, J., Kot, Witold, Frøkiær, Hanne, van Galen, G., Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2019, In : Scientific Reports. 9, 1, 10 p., 12674.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    Fate of CMY-2-Encoding Plasmids Introduced into the Human Fecal Microbiota by Exogenous Escherichia coli

    Anjum, M., Madsen, Jonas Stenløkke, Nesme, Joseph, Jana, B., Wiese, M., Jasinskyte, Dziuginta, Nielsen, Dennis Sandris, Sørensen, Søren Johannes, Dalsgaard, Anders, Moodley, Arshnee, Bortolaia, V. & Guardabassi, Luca, 2019, In : Antimicrobial Agents and Chemotherapy. 63, 5, 13 p., e02528-18.

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. Published

    Identification of the predominant microbiota during production of lait caillé, a spontaneously fermented milk product made in Burkina Faso

    Bayili, G. R., Johansen, Pernille Greve, Nielsen, Dennis Sandris, Sawadogo-Lingani, H., Ouédraogo, G., Diawara, B. & Jespersen, Lene, 2019, In : World journal of microbiology & biotechnology. 35, 7, 13 p., 100.

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. Published

    Impact of Early Exposure to Cefuroxime on the Composition of the Gut Microbiota in Infants Following Cesarean Delivery

    Bin Shamzir Kamal, Shamrulazhar, Hyldig, N., Krych, Lukasz, Greisen, Gorm, Krogfelt, K. A., Zachariassen, G. & Nielsen, Dennis Sandris, 2019, In : Journal of Pediatrics. 210, p. 99-105, e1-e2

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published

    Investigating risk of suboptimal macro and micronutrient intake and their determinants in older Danish adults with specific focus on protein intake — a cross-sectional study

    Schacht, Simon Rønnow, Lind, Mads Vendelbo, Bechshøft, R. L., Højfeldt, G., Reitelseder, S., Jensen, Tenna, Jespersen, Astrid Pernille, Nielsen, Dennis Sandris, Holm, L. & Tetens, Inge , 2019, In : Nutrients. 11, 4, 14 p., 795.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    Kombucha beverage from green, black and rooibos teas: a comparative study looking at microbiology, chemistry and antioxidant activity

    Gaggìa, F., Baffoni, L., Galiano, M., Nielsen, Dennis Sandris, Jakobsen, Rasmus Riemer, Castro Mejia, Josue Leonardo, Bosi, S., Truzzi, F., Musumeci, F., Dinelli, G. & Di Gioia, D., 2019, In : Nutrients. 11, 1, p. 1-22 1.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published

    Lactose and Bovine Milk Oligosaccharides Synergistically Stimulate B. longum subsp. longum Growth in a Simplified Model of the Infant Gut Microbiome

    Jakobsen, L. M. A., Sundekilde, U. K., Andersen, H. J., Nielsen, Dennis Sandris & Bertram, H. C., 2019, In : Journal of Proteome Research. 18, 8, p. 3086-3098

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Published

    Linking cocoa varietals and microbial diversity of Nicaraguan fine cocoa bean fermentations and their impact on final cocoa quality appreciation

    Papalexandratou, Z., Kaasik, K., Kauffmann, L. V., Skorstengaard, A., Bouillon, Grégoire Antoine J R, Espensen, J. L., Hansen, L. H., Jakobsen, Rasmus Riemer, Blennow, Andreas, Krych, Lukasz, Castro Mejia, Josue Leonardo & Nielsen, Dennis Sandris, 2019, In : International Journal of Food Microbiology. 304, p. 106-118

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Published

    Low-moisture food matrices as probiotic carriers

    Marcial-Coba, M. S., Knøchel, Susanne & Nielsen, Dennis Sandris, 2019, In : FEMS Microbiology Letters. 366, 2, p. 1-11 fnz006.

    Research output: Contribution to journalReviewResearchpeer-review

  35. Published
  36. Published

    Oral LPS Dosing Induces Local Immunological Changes in the Pancreatic Lymph Nodes in Mice

    Kihl, P., Krych, Lukasz, Deng, Ling, Kildemoes, A. O., Laigaard, A., Hansen, L. H., Hansen, Camilla Hartmann Friis, Buschard, K., Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2019, In : Journal of Diabetes Research. 2019, 9 p., 1649279.

    Research output: Contribution to journalJournal articleResearchpeer-review

  37. Published

    Prebiotic Effect of Lycopene and Dark Chocolate on Gut Microbiome with Systemic Changes in Liver Metabolism, Skeletal Muscles and Skin in Moderately Obese Persons

    Wiese, M., Bashmakov, Y., Chalyk, N., Nielsen, Dennis Sandris, Krych, Lukasz, Kot, W., Klochkov, V., Pristensky, D., Bandaletova, T., Chernyshova, M., Kyle, N. & Petyaev, I., 2019, In : BioMed Research International. 2019, 15 p., 4625279.

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. Published

    Preterm Birth Has Effects on Gut Colonization in Piglets Within the First 4 Weeks of Life

    Bin Shamzir Kamal, Shamrulazhar, Andersen, A. D., Krych, Lukasz, Lauridsen, C., Sangild, Per Torp, Thymann, Thomas & Nielsen, Dennis Sandris, 2019, In : Journal of Pediatric Gastroenterology and Nutrition. 68, 5, p. 727-733 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    Severe gut microbiota dysbiosis caused by malnourishment can be partly restored during 3 weeks of refeeding with fortified corn-soy-blend in a piglet model of childhood malnutrition

    Leng, B., Sørensen, M. B., Kot, W., Thymann, Thomas, Krych, Lukasz & Nielsen, Dennis Sandris, 2019, In : BMC Microbiology. 19, 9 p., 277.

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Published

    Short communication: Gut microbial colonization of the mouse colon using faecal transfer was equally effective when comparing rectal inoculation and oral inoculation based on 16S rRNA sequencing

    Lützhøft, Ditte Olsen, Sánchez-Alcoholado, L., Tougaard, P., Mentzel, Caroline M. Junker, Kot, Witold, Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2019, In : Research in Veterinary Science. 126, p. 227-232 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  41. Published

    TL1A Aggravates Cytokine-Induced Acute Gut Inflammation and Potentiates Infiltration of Intraepithelial Natural Killer Cells in Mice

    Tougaard, P., Martinsen, L. O., Fisker, Line, Krych, Lukasz, Nielsen, Dennis Sandris, Buus, Terkild Brink, Pedersen, Anders Elm, Hansen, Axel Kornerup, Skov, Søren & Hansen, Camilla Hartmann Friis, 2019, In : Inflammatory Bowel Diseases. 25, 3, p. 510-523

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    Targeting gut microbiota and barrier function with prebiotics to alleviate autoimmune manifestations in NOD mice

    Hansen, Camilla Hartmann Friis, Larsen, C. S., Petersson, H. O., Fisker, Line, Vegge, A., Lauridsen, C., Kot, W., Krych, Lukasz, Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2019, In : Diabetologia. 62, 9, p. 1689-1700

    Research output: Contribution to journalJournal articleResearchpeer-review

  43. Published

    The gut microbiome on a periodized low-protein diet is associated with improved metabolic health

    Li, Z., Rasmussen, Torben Sølbeck, Rasmussen, M. L., Li, J., Henriquez Olguín, Carlos, Kot, W., Nielsen, Dennis Sandris & Jensen, Thomas Elbenhardt, 2019, In : Frontiers in Microbiology. 10, 10 p., 709.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. 2018
  45. Published

    A bacteriophage cocktail targeting Escherichia coli reduces E. coli in simulated gut conditions, while preserving a non-targeted representative commensal normal microbiota

    Cieplak, T., Soffer, N., Sulakvelidze, A. & Nielsen, Dennis Sandris, 2018, In : Gut Microbes. 9, 5, p. 391-399 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    A culture-independent method for studying transfer of IncI1 plasmids from wild-type Escherichia coli in complex microbial communities

    Anjum, M., Madsen, Jonas Stenløkke, Espinosa-Gongora, Carmen, Jana, B., Wiese, M., Nielsen, Dennis Sandris, Sørensen, Søren Johannes, Moodley, Arshnee, Bortolaia, V. & Guardabassi, Luca, 2018, In : Journal of Microbiological Methods. 152, p. 18-26 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    A prebiotic intervention study in children with autism spectrum disorders (ASDs)

    Grimaldi, R., Gibson, G. R., Vulevic, J., Giallourou, N., Castro Mejia, Josue Leonardo, Hansen, L. H., Gibson, E. L., Nielsen, Dennis Sandris & Costabile, A., 2018, In : Microbiome. 6, 13 p., 133.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Bovine Milk Oligosaccharides with Sialyllactose for Preterm Piglets

    Obelitz-Ryom, Karina, Rendboe, A. K., Nguyen, Duc Ninh, Rudloff, S., Brandt, A. B., Nielsen, Dennis Sandris, Heckmann, A. B., Chichlowski, M., Sangild, Per Torp, Thymann, Thomas & Bering, Stine Brandt, 2018, In : Nutrients. 10, 10, p. 1-18 1489.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Changes in Gut Microbiota Prior to Influenza A Virus Infection Do Not Affect Immune Responses in Pups or Juvenile Mice

    Fuglsang, E., Pizzolla, A., Krych, Lukasz, Nielsen, Dennis Sandris, Brooks, A. G., Frøkiær, Hanne & Reading, P. C., 2018, In : Frontiers in Cellular and Infection Microbiology. 8, 16 p., 319.

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published

    CoMiniGut - a small volume in vitro colon model for the screening of gut microbial fermentation processes

    Wiese, M., Khakimov, Bekzod, Nielsen, Sebastian, Sørensen, H., van der Berg, Franciscus Winfried J & Nielsen, Dennis Sandris, 2018, In : PeerJ. 6, 22 p., e4268.

    Research output: Contribution to journalJournal articleResearchpeer-review

  51. Published

    Effect of the dietary polyacetylenes falcarinol and falcarindiol on the gut microbiota composition in a rat model of colorectal cancer

    Kobaek-Larsen, M., Nielsen, Dennis Sandris, Kot, W., Krych, Lukasz, Christensen, L. P. & Baatrup, G., 2018, In : BMC Research Notes. 11, p. 1-6 411.

    Research output: Contribution to journalJournal articleResearchpeer-review

  52. Published

    Extraction and purification of viruses from fecal samples for metagenome and morphology analyses

    Castro Mejia, Josue Leonardo, Deng, Ling, Vogensen, Finn Kvist, Reyes, A. & Nielsen, Dennis Sandris, 2018, The Human Virome: Methods and Protocols. Moya, A. & Brocal, V. P. (eds.). Humana Press, p. 49-57 9 p. (Methods in Molecular Biology, Vol. 1838).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  53. Published

    Gut microbiota recovery and immune response in ampicillin-treated mice

    Castro Mejia, Josue Leonardo, Jakesevic, M., Fabricius, N. F., Krych, Lukasz, Nielsen, Dennis Sandris, Kot, W., Bendtsen, K. M. B., Vogensen, Finn Kvist, Hansen, Camilla Hartmann Friis & Hansen, Axel Kornerup, 2018, In : Research in Veterinary Science. 118, p. 357-364 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  54. Published

    Have you tried spermine? A rapid and cost-effective method to eliminate dextran sodium sulfate inhibition of PCR and RT-PCR

    Krych, Lukasz, Kot, W., Bendtsen, K. M. B., Hansen, Axel Kornerup, Vogensen, Finn Kvist & Nielsen, Dennis Sandris, 2018, In : Journal of Microbiological Methods. 144, p. 1-7 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  55. Published

    Influenza A Virus Infection Alters Gut Microbiota Composition in Juvenile Mice

    Fuglsang, E., Krych, Lukasz, Nielsen, Dennis Sandris, Frøkiær, Hanne & Reading, P. C., 2018, In : Journal of Infectious Diseases & Travel Medicine. 2, 3, 10 p., 000118.

    Research output: Contribution to journalJournal articleResearchpeer-review

  56. Published

    Ingestion of an Inulin-Enriched Pork Sausage Product Positively Modulates the Gut Microbiome and Metabolome of Healthy Rats

    Thøgersen, R., Castro Mejia, Josue Leonardo, Sundekilde, U. K., Hansen, L. H., Hansen, Axel Kornerup, Nielsen, Dennis Sandris & Bertram, H. C., 2018, In : Molecular Nutrition and Food Research. 62, 19, p. 1-10 1800608.

    Research output: Contribution to journalJournal articleResearchpeer-review

  57. Published

    Investigation of the bacteriophage community in induced lysates of undefined mesophilic mixed-strain DL-cultures using classical and metagenomic approaches

    Muhammed, Musemma Kedir, Olsen, M. L., Kot, Witold, Neve, H., Castro Mejia, Josue Leonardo, Janzen, T., Hansen, L. H., Nielsen, Dennis Sandris, Sørensen, Søren Johannes, Heller, K. J. & Vogensen, Finn Kvist, 2018, In : International Journal of Food Microbiology. 272, p. 61-72 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  58. Published

    Lacto-fermented sauerkraut improves symptoms in IBS patients independent of product pasteurisation - a pilot study

    Nielsen, E. S., Garnås, E., Jensen, K. J., Hansen, L. H., Olsen, P. S., Ritz, Christian, Krych, Lukasz & Nielsen, Dennis Sandris, 2018, In : Food & Function. 9, 10, p. 5323-5335 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  59. Published

    Long-term Western diet fed apolipoprotein E-deficient rats exhibit only modest early atherosclerotic characteristics

    Rune, I., Rolin, B., Lykkesfeldt, Jens, Nielsen, Dennis Sandris, Krych, Lukasz, Kanter, J. E., Bornfeldt, K. E., Kihl, P., Buschard, Karsten Stig, Josefsen, K., Fels, J. J., Mortensen, A., Christoffersen, B., Kirk, R. K. & Hansen, Axel Kornerup, 2018, In : Scientific Reports. 8, 1, 12 p., 5416.

    Research output: Contribution to journalJournal articleResearchpeer-review

  60. Published

    Low glycaemic index foods from wild barley and amylose-only barley lines

    Sagnelli, D., Chessa, S., Mandalari, G., Di Martino, M., Sorndech, W., Mamone, G., Vincze, E., Buillon, G., Nielsen, Dennis Sandris, Wiese, M., Blennow, Andreas & Hebelstrup, K. H., 2018, In : Journal of Functional Foods. 40, p. 408-416 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  61. Published

    Neonatal gut and immune maturation is determined more by postnatal age than by postconceptional age in moderately preterm pigs

    Ren, S., Hui, Yan, Obelitz-Ryom, Karina, Brandt, A. B., Kot, W., Nielsen, Dennis Sandris, Thymann, Thomas, Sangild, Per Torp & Nguyen, Duc Ninh, 2018, In : American Journal of Physiology: Gastrointestinal and Liver Physiology. 315, 5, p. G855-G867

    Research output: Contribution to journalJournal articleResearchpeer-review

  62. Published

    Occurrence of lactic acid bacteria and yeasts at species and strain level during spontaneous fermentation of mawè, a cereal dough produced in West Africa

    Houngbédji, M., Johansen, Pernille Greve, Padonou, S. W., Akissoe, N., Arneborg, Nils, Nielsen, Dennis Sandris, Hounhouigan, D. J. & Jespersen, Lene, 2018, In : Food Microbiology. 76, p. 267-278 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  63. Published

    Oral insulin does not alter gut microbiota composition of NOD mice

    Kihl, P., Krych, Lukasz, Buschard, Karsten Stig, Wesley, J. D., Kot, W., Hansen, Axel Kornerup, Nielsen, Dennis Sandris & von Herrath, M. G., 2018, In : Diabetes/Metabolism Research and Reviews. 34, 6, 9 p., e3010.

    Research output: Contribution to journalJournal articleResearchpeer-review

  64. Published

    Postnatal Administration of Lactobacillus rhamnosus HN001 Ameliorates Perinatal Broad-Spectrum Antibiotic-Induced Reduction in Myelopoiesis and T Cell Activation in Mouse Pups

    Fuglsang, E., Krych, Lukasz, Lundsager, M. T., Nielsen, Dennis Sandris & Frøkiær, Hanne, 2018, In : Molecular Nutrition and Food Research. 62, 22, p. 1-12 1800510.

    Research output: Contribution to journalJournal articleResearchpeer-review

  65. Published

    The Antibacterial Effect In Vitro of Honey Derived from Various Danish Flora

    Matzen, R. D., Leth-Espensen, J. Z., Jansson, T., Nielsen, Dennis Sandris, Lund, Marianne N. & Matzen, S. H., 2018, In : Dermatology Research and Practice. 2018, 10 p., 7021713.

    Research output: Contribution to journalJournal articleResearchpeer-review

  66. Published

    The Smallest Intestine (TSI) - a low volume in vitro model of the small intestine with increased throughput

    Cieplak, T., Wiese, M., Nielsen, Sebastian, Van De Wiele, T., van der Berg, Franciscus Winfried J & Nielsen, Dennis Sandris, 2018, In : FEMS Microbiology Letters. 365, 21, p. 1-8 fny231.

    Research output: Contribution to journalJournal articleResearchpeer-review

  67. Published

    Viability of microencapsulated Akkermansia muciniphila and Lactobacillus plantarum during freeze-drying, storage and in vitro simulated upper gastrointestinal tract passage

    Marcial-Coba, M. S., Cieplak, T., Cahú, T. B., Blennow, Andreas, Knøchel, Susanne & Nielsen, Dennis Sandris, 2018, In : Food & Function. 9, 11, p. 5868-5879

    Research output: Contribution to journalJournal articleResearchpeer-review

  68. 2017
  69. Published

    A high-throughput qPCR system for simultaneous quantitative detection of dairy Lactococcus lactis and Leuconostoc bacteriophages

    Muhammed, Musemma Kedir, Krych, Lukasz, Nielsen, Dennis Sandris & Vogensen, Finn Kvist, 2017, In : PLOS ONE. 12, 3, 12 p., e0174223.

    Research output: Contribution to journalJournal articleResearchpeer-review

  70. Published

    A polyphenol-enriched diet and Ascaris suum infection modulate mucosal immune responses and gut microbiota composition in pigs

    Williams, Andrew Richard, Krych, Lukasz, Fauzan Ahmad, H., Nejsum, P., Skovgaard, K., Nielsen, Dennis Sandris & Thamsborg, Stig Milan, 2017, In : PLOS ONE. 12, 10, 21 p., e0186546.

    Research output: Contribution to journalJournal articleResearchpeer-review

  71. Published

    Deciphering the association networks of mycobiome communities among the elderly Danes

    Bin Ahmad, H. F., Faust, K., Castro Mejia, Josue Leonardo, Kot, W., Bechshøft, R., Reitelseder, S., Holm, L. & Nielsen, Dennis Sandris, 2017. 1 p.

    Research output: Contribution to conferencePosterResearch

  72. Published

    Dietary cinnamaldehyde enhances acquisition of specific antibodies following helminth infection in pigs

    Williams, Andrew Richard, Hansen, T. V. A., Krych, Lukasz, Bin Ahmad, H. F., Nielsen, Dennis Sandris, Skovgaard, K. & Thamsborg, Stig Milan, 2017, In : Veterinary Immunology and Immunopathology. 189, p. 43-52 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  73. Published

    Gut microbiota composition may relate to weight loss rate in obese pet dogs

    Kieler, Ida Nordang, Bin Shamzir Kamal, Shamrulazhar, Vitger, Anne Désiré, Nielsen, Dennis Sandris, Lauridsen, C. & Bjørnvad, Charlotte Reinhard, 2017, In : Veterinary Medicine and Science. 3, 4, p. 252-262 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  74. Published

    High-Quality Draft Genome Sequence of Lactobacillus casei Strain Z11, Isolated from a Human Adult Intestinal Biopsy Sample

    Coba, M. S. M., Marshall, I. P. G., Schreiber, L. & Nielsen, Dennis Sandris, 2017, In : Genome Announcements. 5, 28, 2 p., e00634-17.

    Research output: Contribution to journalJournal articleResearchpeer-review

  75. Published

    Metagenomic analysis of dairy bacteriophages: extraction method and pilot study on whey samples derived from using undefined and defined mesophilic starter cultures

    Muhammed, Musemma Kedir, Kot, Witold, Neve, H., Mahony, J., Castro Mejia, Josue Leonardo, Krych, Lukasz, Hansen, L. H., Nielsen, Dennis Sandris, Sørensen, Søren Johannes, Heller, K. J., van Sinderen, D. & Vogensen, Finn Kvist, 2017, In : Applied and Environmental Microbiology. 83, 19, 15 p., e00888-17.

    Research output: Contribution to journalJournal articleResearchpeer-review

  76. Published

    Sensitivity to oxazolone induced dermatitis is transferable with gut microbiota in mice

    Fisker, Line, Krych, Lukasz, Engkilde, K., Nielsen, Dennis Sandris, Kot, W. P., Hansen, Camilla Hartmann Friis & Hansen, Axel Kornerup, 2017, In : Scientific Reports. 7, 11 p., 44385.

    Research output: Contribution to journalJournal articleResearchpeer-review

  77. Published

    The effect of oral administration of antibiotics on Schistosoma mansoni egg-induced pathology in mouse models

    Kildemoes, A. O., Schramm, G., Pakkenberg, Bente, Hansen, Axel Kornerup, Skov, Søren, Nielsen, Dennis Sandris & Vennervald, Birgitte J, 2017, In : Tropical Medicine & International Health. 22, S1, p. 12-13 2 p., 1S6.3.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  78. Published

    Whole-grain rye and wheat affect some markers of gut health without altering the fecal microbiota in healthy overweight adults: A 6-week randomized trial

    Vuholm, Stine, Nielsen, Dennis Sandris, Iversen, K. N., Suhr, J., Westermann, P., Krych, Lukasz, Andersen, Jens Rikardt & Kristensen, M., 2017, In : Journal of Nutrition. 147, 11, p. 2067-2075 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  79. 2016
  80. Published
  81. Published

    Different microbiomes associated with the copepods Acartia tonsa and Temora longicornis from the same marine environment

    Dorosz, J. N. A., Castro Mejia, Josue Leonardo, Hansen, L. H., Nielsen, Dennis Sandris & Skovgaard, A., 2016, In : Aquatic Microbial Ecology. 78, 1, p. 1-9 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  82. Published

    Enteral but not parenteral antibiotics enhance gut function and prevent necrotizing enterocolitis in formula-fed newborn preterm pigs

    Birck, M. M., Nguyen, Duc Ninh, Cilieborg, Malene Skovsted, Bin Shamzir Kamal, Shamrulazhar, Nielsen, Dennis Sandris, Damborg, Peter Panduro, Olsen, John Elmerdahl, Lauridsen, C., Sangild, Per Torp & Thymann, Thomas, 2016, In : American Journal of Physiology: Gastrointestinal and Liver Physiology. 310, 5, p. G323-G333 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  83. Published

    Fermentation of African kale (Brassica carinata) using L. plantarum BFE 5092 and L. fermentum BFE 6620 starter strains

    Oguntoyinbo, F. A., Cho, G., Trierweiler, B., Kabisch, J., Rösch, N., Neve, H., Bockelmann, W., Frommherz, L., Nielsen, Dennis Sandris, Krych, Lukasz & Franz, C. M. A. P., 2016, In : International Journal of Food Microbiology. 238, p. 103-112 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  84. Published

    Gut microbiota in children hospitalized with oedematous and non-oedematous severe acute malnutrition in Uganda

    Kristensen, K. H. S., Wiese, M., Rytter, M. J. H., Özçam, M., Hansen, L. H., Namusoke, H., Friis, Henrik & Nielsen, Dennis Sandris, 2016, In : P L o S Neglected Tropical Diseases (Online). 10, 1, 11 p., e0004369.

    Research output: Contribution to journalJournal articleResearchpeer-review

  85. Published

    In vitro screening and evaluation of synbiotics

    Martinsson, M. L., Wiese, M., Nielsen, Dennis Sandris & van Zanten, G. C., 2016, Probiotics, prebiotics and synbiotics: bioactive foods in health promotion. Watson, R. R. & Preedy, V. R. (eds.). Academic Press, p. 477-486 10 p.

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  86. Published

    It's gettin' hot in here: breeding robust yeast starter cultures for cocoa fermentation

    Papalexandratou, Z. & Nielsen, Dennis Sandris, 2016, In : Trends in Microbiology. 24, 3, p. 168-170 3 p.

    Research output: Contribution to journalComment/debateResearchpeer-review

  87. Published

    Modulating the gut microbiota improves glucose tolerance, lipoprotein profile and atherosclerotic plaque development in ApoE-deficient mice

    Rune, I., Rolin, B., Larsen, C. S., Nielsen, Dennis Sandris, Kanter, J. E., Bornfeldt, K. E., Lykkesfeldt, Jens, Buschard, K., Kirk, R. K., Christoffersen, B., Fels, J. J., Josefsen, K., Kihl, P. & Hansen, Axel Kornerup, 2016, In : P L o S One. 11, 1, 16 p., e0146439.

    Research output: Contribution to journalJournal articleResearchpeer-review

  88. Published

    Oral antibiotics increase blood neutrophil maturation and reduce bacteremia and necrotizing enterocolitis in the immediate postnatal period of preterm pigs

    Nguyen, Duc Ninh, Fuglsang, E., Jiang, P., Birck, M. M., Pan, Xiaoyu, Bin Shamzir Kamal, Shamrulazhar, Pors, S. E., Gammelgaard, P. L., Nielsen, Dennis Sandris, Thymann, Thomas, Levy, O., Frøkiær, Hanne & Sangild, Per Torp, 2016, In : Innate Immunity. 22, 1, p. 51-62 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  89. Published

    Postnatal hematopoiesis and gut microbiota in NOD mice deviate from C57BL/6 mice

    Damlund, D. S. M., Metzdorff, S. B., Hasselby, Jane Preuss, Wiese, M., Lundsager, M. T., Nielsen, Dennis Sandris, Buschard, Karsten Stig, Hansen, Axel Kornerup & Frøkiær, Hanne, 2016, In : Journal of Diabetes Research. 2016, 15 p., 6321980.

    Research output: Contribution to journalJournal articleResearchpeer-review

  90. Published

    Provision of amniotic fluid during parenteral nutrition increases weight gain with limited effects on gut structure, function, immunity, and microbiology in newborn preterm pigs

    Østergaard, M. V., Shen, R. L., Støy, A. C. F., Skovgaard, K., Krych, Ł., Leth, S. S., Nielsen, Dennis Sandris, Hartmann, Bolette, Bering, Stine Brandt, Schmidt, M. & Sangild, Per Torp, 2016, In : Journal of Parenteral and Enteral Nutrition. 40, 4, p. 552-566 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  91. Published

    Survival of Lactobacillus acidophilus NCFM® and Bifidobacterium lactis HN019 encapsulated in chocolate during in vitro simulated passage of the upper gastrointestinal tract

    Klindt-Toldam, S., Larsen, S. K., Saaby, L., Olsen, L. R., Svenstrup, G., Mullertz, Anette , Knøchel, Susanne, Heimdal, H., Nielsen, Dennis Sandris & Zielińska, D., 2016, In : Lebensmittel - Wissenschaft und Technologie. 74, p. 404-410 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  92. Published

    The gut mycobiome of elderly danes

    Bin Ahmad, H. F., Castro Mejia, Josue Leonardo, Kot, W., Bechshøft, R. L., Reitelseder, S., Holm, L. & Nielsen, Dennis Sandris, 2016. 1 p.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  93. Published

    The half-life and exposure of cefuroxime varied in newborn infants after a Caesarean section

    Zachariassen, G., Hyldig, N., Joergensen, J. S., Nielsen, Dennis Sandris & Greisen, Gorm, 2016, In : Acta Paediatrica. 105, 9, p. 1074-1078 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  94. Published

    Treatment with a monoclonal anti-IL-12p40 antibody induces substantial gut microbiota changes in an experimental colitis model

    Castro Mejia, Josue Leonardo, Jakesevic, M., Krych, Lukasz, Nielsen, Dennis Sandris, Hansen, L. H., Sondergaard, B. C., Kvist, P. H., Hansen, Axel Kornerup & Holm, T. L., 2016, In : Gastroenterology Research and Practice. 2016, 12 p., 4953120.

    Research output: Contribution to journalJournal articleResearchpeer-review

  95. 2015
  96. Published

    Hanseniaspora jakobsenii sp nov., a yeast isolated from Bandji, a traditional palm wine of Borassus akeassii

    Ouoba, L. I. I., Nielsen, Dennis Sandris, Anyogu, A., Kando, C., Diawara, B., Jespersen, Lene & Sutherland, J. P., 2015, In : International Journal of Systematic and Evolutionary Microbiology. 65, 10, p. 3576-3579 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  97. Published

    Lysinibacillus louembei sp. nov., a spore-forming bacterium isolated from Ntoba Mbodi, alkaline fermented leaves of cassava from the Republic of the Congo

    Ouoba, L. I. I., Mbozo, A. B. V., Thorsen, L., Anyogu, A., Nielsen, Dennis Sandris, Kobawila, S. C. & Sutherland, J. P., 2015, In : International Journal of Systematic and Evolutionary Microbiology. 65, 11, p. 4256-4262 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  98. Published

    A review of applied aspects of dealing with gut microbiota impact on rodent models

    Hansen, Axel Kornerup, Krych, Lukasz, Nielsen, Dennis Sandris & Hansen, Camilla Hartmann Friis, 2015, In : ILAR Journal. 56, 2, p. 250-64 15 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  99. Published

    Bacteriocin formation by dominant aerobic sporeformers isolated from traditional Maari

    Kaborè, D., Thorsen, L., Nielsen, Dennis Sandris, Berner, T. S., Sawadogo-Lingani, H., Diawara, B., Dicko, M. H. & Jakobsen, Mogens, 2015. 1 p.

    Research output: Contribution to conferencePosterResearch

  100. Published

    Colonic lesions, cytokine profiles, and gut microbiota in plasminogen-deficient mice

    Vestergaard, B., Krych, Lukasz, Lund, L. R., Jørgensen, B. M. P., Hansen, Lars Hestbjerg, Jensen, Henrik Elvang, Nielsen, Dennis Sandris & Hansen, Axel Kornerup, 2015, In : Comparative Medicine. 65, 5, p. 382-397 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  101. Published

    Dietary magnesium deficiency affects gut microbiota and anxiety-like behaviour in C57BL/6N mice

    Jørgensen, B. M. P., Winther, G., Kihl, P., Nielsen, Dennis Sandris, Wegener, G., Hansen, Axel Kornerup & Sørensen, Dorte Bratbo, 2015, In : Acta Neuropsychiatrica (Print). 27, 5, p. 307-311 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  102. Published

    Dietary magnesium deficiency alters gut microbiota and leads to depressive-like behaviour

    Winther, G., Jørgensen, B. M. P., Elfving, B., Nielsen, Dennis Sandris, Kihl, P., Lund, S., Sørensen, Dorte Bratbo & Wegener, G., 2015, In : Acta Neuropsychiatrica (Print). 27, 3, p. 168-176 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  103. Published

    Early gradual feeding with bovine colostrum improves gut function and NEC resistance relative to infant formula in preterm pigs

    Shen, R. L., Thymann, Thomas, Østergaard, M. V., Støy, A. C. F., Krych, Lukasz, Nielsen, Dennis Sandris, Lauridsen, C., Hartmann, Bolette, Holst, Jens Juul, Burrin, D. G. & Sangild, Per Torp, 2015, In : American Journal of Physiology: Gastrointestinal and Liver Physiology. 309, 5, p. G310-G323 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  104. Published

    Growth/no growth models for Zygosaccharomyces rouxii associated with acidic, sweet intermediate moisture food products

    Nielsen, C. L. M., Kristiansen, R. M. & Nielsen, Dennis Sandris, 2015, In : International Journal of Food Microbiology. 192, p. 51-57 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  105. Published

    Gut microbial markers are associated with diabetes onset, regulatory imbalance, and IFN-γ level in NOD mice

    Krych, Lukasz, Nielsen, Dennis Sandris, Hansen, Axel Kornerup & Hansen, Camilla Hartmann Friis, 2015, In : Gut Microbes. 6, 2, p. 101-109 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  106. Published

    Gut microbiota composition may relate to weight loss rate in obese pet dogs

    Kieler, Ida Nordang, Vitger, Anne Désiré, Bin Shamzir Kamal, Shamrulazhar, Nielsen, Dennis Sandris & Bjørnvad, Charlotte Reinhard, 2015, European Society of Veterinary and Comparative Nutrition. 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference abstract in proceedingsResearchpeer-review

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