Matthias Mann

Matthias Mann

Research director, professor


  1. 2019
  2. A mass spectrometry guided approach for the identification of novel vaccine candidates in gram-negative pathogens. / Hornburg, Daniel; Kruse, Tobias; Anderl, Florian; Daschkin, Christina; Semper, Raphaela P; Klar, Kathrin; Guenther, Anna; Mejías-Luque, Raquel; Schneiderhan-Marra, Nicole; Mann, Matthias; Meissner, Felix; Gerhard, Markus.

    In: Scientific Reports, Vol. 9, No. 1, 22.11.2019, p. 17401.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Defective glycosylation and multisystem abnormalities characterize the primary immunodeficiency XMEN disease. / Ravell, Juan C; Matsuda-Lennikov, Mami; Chauvin, Samuel D; Zou, Juan; Biancalana, Matthew; Deeb, Sally J; Price, Susan; Su, Helen C; Notarangelo, Giulia; Jiang, Ping; Morawski, Aaron; Kanellopoulou, Chrysi; Binder, Kyle W; Mukherjee, Ratnadeep; Anibal, James T; Sellers, Brian; Zheng, Lixin; He, Tingyan; George, Alex B; Pittaluga, Stefania; Powers, Astin; Kleiner, David E; Kapuria, Devika; Ghany, Marc; Hunsberger, Sally; Cohen, Jeffrey I; Uzel, Gulbu; Bergerson, Jenna; Wolfe, Lynne; Toro, Camilo; Gahl, William; Folio, Les R; Matthews, Helen; Angelus, Pam; Chinn, Ivan K; Orange, Jordan S; Trujillo-Vargas, Claudia M; Franco, Jose Luis; Orrego-Arango, Julio; Gutiérrez-Hincapié, Sebastian; Patel, Niraj Chandrakant; Raymond, Kimiyo; Patiroglu, Turkan; Unal, Ekrem; Karakukcu, Musa; Day, Alexandre Gr; Mehta, Pankaj; Masutani, Evan; De Ravin, Suk S; Malech, Harry L; Altan-Bonnet, Grégoire; Rao, V Koneti; Mann, Matthias; Lenardo, Michael J.

    In: The Journal of Clinical Investigation, 05.11.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Interconversion between Anticipatory and Active GID E3 Ubiquitin Ligase Conformations via Metabolically Driven Substrate Receptor Assembly. / Qiao, Shuai; Langlois, Christine R; Chrustowicz, Jakub; Sherpa, Dawafuti; Karayel, Ozge; Hansen, Fynn M; Beier, Viola; von Gronau, Susanne; Bollschweiler, Daniel; Schäfer, Tillman; Alpi, Arno F; Mann, Matthias; Prabu, J Rajan; Schulman, Brenda A.

    In: Molecular Cell, 01.11.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. SILAC-based quantitative mass spectrometry-based proteomics quantifies endoplasmic reticulum stress in whole HeLa cells. / Itzhak, Daniel N; Sacco, Francesca; Nagaraj, Nagarjuna; Tyanova, Stefka; Mann, Matthias; Murgia, Marta.

    In: Disease models & mechanisms, 18.10.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Sleep-wake cycles drive daily dynamics of synaptic phosphorylation. / Brüning, Franziska; Noya, Sara B; Bange, Tanja; Koutsouli, Stella; Rudolph, Jan D; Tyagarajan, Shiva K; Cox, Jürgen; Mann, Matthias; Brown, Steven A; Robles, Maria S.

    In: Science (New York, N.Y.), Vol. 366, No. 6462, eaav3617 , 11.10.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. The forebrain synaptic transcriptome is organized by clocks but its proteome is driven by sleep. / Noya, Sara B; Colameo, David; Brüning, Franziska; Spinnler, Andrea; Mircsof, Dennis; Opitz, Lennart; Mann, Matthias; Tyagarajan, Shiva K; Robles, Maria S; Brown, Steven A.

    In: Science (New York, N.Y.), Vol. 366, No. 6462, eaav2642 , 11.10.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. The Atherosclerosis Risk Variant rs2107595 Mediates Allele-Specific Transcriptional Regulation of HDAC9 via E2F3 and Rb1. / Prestel, Matthias; Prell-Schicker, Caroline; Webb, Tom; Malik, Rainer; Lindner, Barbara; Ziesch, Natalie; Rex-Haffner, Monika; Röh, Simone; Viturawong, Thanatip; Lehm, Manuel; Mokry, Michal; den Ruijter, Hester; Haitjema, Saskia; Asare, Yaw; Söllner, Flavia; Najafabadi, Maryam Ghaderi; Aherrahrou, Rédouane; Civelek, Mete; Samani, Nilesh J; Mann, Matthias; Haffner, Christof; Dichgans, Martin.

    In: Stroke, Vol. 50, No. 10, 10.2019, p. 2651-2660.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Key Features Relevant to Select Antigens and TCR From the MHC-Mismatched Repertoire to Treat Cancer. / Audehm, Stefan; Glaser, Manuel; Pecoraro, Matteo; Bräunlein, Eva; Mall, Sabine; Klar, Richard; Effenberger, Manuel; Albers, Julian; Bianchi, Henrique de Oliveira; Peper, Janet; Yusufi, Nahid; Busch, Dirk H; Stevanović, Stefan; Mann, Matthias; Antes, Iris; Krackhardt, Angela M.

    In: Frontiers in Immunology, Vol. 10, 1485, 28.06.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Fibro-adipogenic progenitors of dystrophic mice are insensitive to NOTCH regulation of adipogenesis. / Marinkovic, Milica; Fuoco, Claudia; Sacco, Francesca; Cerquone Perpetuini, Andrea; Giuliani, Giulio; Micarelli, Elisa; Pavlidou, Theodora; Petrilli, Lucia Lisa; Reggio, Alessio; Riccio, Federica; Spada, Filomena; Vumbaca, Simone; Zuccotti, Alessandro; Castagnoli, Luisa; Mann, Matthias; Gargioli, Cesare; Cesareni, Gianni.

    In: Life Science Alliance, Vol. 2, No. 3, 06.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Multi-omic Profiling Reveals Dynamics of the Phased Progression of Pluripotency. / Yang, Pengyi; Humphrey, Sean J; Cinghu, Senthilkumar; Pathania, Rajneesh; Oldfield, Andrew J; Kumar, Dhirendra; Perera, Dinuka; Yang, Jean Y H; James, David E; Mann, Matthias; Jothi, Raja.

    In: Cell Systems, Vol. 8, No. 5, 22.05.2019, p. 427-445.e10.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Cortical circuit alterations precede motor impairments in Huntington's disease mice. / Burgold, Johanna; Schulz-Trieglaff, Elena Katharina; Voelkl, Kerstin; Gutiérrez-Ángel, Sara; Bader, Jakob Maximilian; Hosp, Fabian; Mann, Matthias; Arzberger, Thomas; Klein, Rüdiger; Liebscher, Sabine; Dudanova, Irina.

    In: Scientific Reports, Vol. 9, No. 1, 29.04.2019, p. 6634.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Phosphoproteomics Reveals the GSK3-PDX1 Axis as a Key Pathogenic Signaling Node in Diabetic Islets. / Sacco, Francesca; Seelig, Anett; Humphrey, Sean J; Krahmer, Natalie; Volta, Francesco; Reggio, Alessio; Marchetti, Piero; Gerdes, Jantje; Mann, Matthias.

    In: Cell Metabolism, 07.03.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. A protein-interaction network of interferon-stimulated genes extends the innate immune system landscape. / Hubel, Philipp; Urban, Christian; Bergant, Valter; Schneider, William M; Knauer, Barbara; Stukalov, Alexey; Scaturro, Pietro; Mann, Angelika; Brunotte, Linda; Hoffmann, Heinrich H; Schoggins, John W; Schwemmle, Martin; Mann, Matthias; Rice, Charles M; Pichlmair, Andreas.

    In: Nature Immunology, 04.03.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. An atlas of the aging lung mapped by single cell transcriptomics and deep tissue proteomics. / Angelidis, Ilias; Simon, Lukas M; Fernandez, Isis E; Strunz, Maximilian; Mayr, Christoph H; Greiffo, Flavia R; Tsitsiridis, George; Ansari, Meshal; Graf, Elisabeth; Strom, Tim-Matthias; Nagendran, Monica; Desai, Tushar; Eickelberg, Oliver; Mann, Matthias; Theis, Fabian J; Schiller, Herbert B.

    In: Nature Communications, Vol. 10, No. 1, 27.02.2019, p. 963.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Catching Lipid Droplet Contacts by Proteomics. / Krahmer, Natalie; Mann, Matthias.

    In: Contact, Vol. 2, 2019, p. 1-8.

    Research output: Contribution to journalReviewResearchpeer-review

  17. Published

    Efficient mitotic checkpoint signaling depends on integrated activities of Bub1 and the RZZ complex. / Zhang, Gang; Kruse, Thomas; Guasch Boldú, Claudia; Garvanska, Dimitriya H; Coscia, Fabian; Mann, Matthias; Barisic, Marin; Nilsson, Jakob.

    In: E M B O Journal, Vol. 38, No. 7, e100977, 2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    MaxQuant.Live enables global targeting of more than 25,000 peptides. / Wichmann, Christoph; Meier, Florian; Virreira Winter, Sebastian; Brunner, Andreas-David; Cox, Jürgen; Mann, Matthias.

    In: Molecular and Cellular Proteomics, Vol. 18, No. 5, 2019, p. 982-994.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Metallopeptidase Inhibitor 1 (TIMP-1) promotes receptor tyrosine kinase c-Kit signaling in colorectal cancer. / Nordgaard, Cathrine; Doll, Sophia; Matos, Ana Laura de Souza Almeida; Høeberg, Mikkel; Kazi, Julhash Uddin; Friis, Stine; Stenvang, Jan; Rönnstrand, Lars; Mann, Matthias; Moreira, José Manuel Afonso.

    In: Molecular Oncology, Vol. 13, No. 12, 2019, p. 2646-2662.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    Myosin binding protein H-like (MYBPHL) : a promising biomarker to predict atrial damage. / Lahm, Harald; Dressen, Martina; Beck, Nicole; Doppler, Stefanie; Deutsch, Marcus-Andre; Matsushima, Shunsuke; Neb, Irina; Koenig, Karl Christian; Sideris, Konstantinos; Voss, Stefanie; Eschenbach, Lena; Puluca, Nazan; Deisenhofer, Isabel; Doll, Sophia; Holdenrieder, Stefan; Mann, Matthias; Lange, Ruediger; Krane, Markus.

    In: Scientific Reports, Vol. 9, 9986, 2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Plasma Proteome Profiling to detect and avoid sample-related biases in biomarker studies. / Geyer, Philipp E.; Voytik, Eugenia; Treit, Peter V.; Doll, Sophia; Kleinhempel, Alisa; Niu, Lili; Müller, Johannes B; Buchholtz, Marie-Luise; Bader, Jakob M; Teupser, Daniel; Holdt, Lesca M; Mann, Matthias.

    In: EMBO Molecular Medicine, Vol. 11, No. 11, e10427, 2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Plasma proteome profiling discovers novel proteins associated with non-alcoholic fatty liver disease. / Niu, Lili; Geyer, Philipp E.; Albrechtsen, Nicolai Jacob Wewer; Gluud, Lise L; Santos, Alberto; Doll, Sophia; Treit, Peter V; Holst, Jens J; Knop, Filip K; Vilsbøll, Tina; Junker, Anders; Sachs, Stephan; Stemmer, Kerstin; Müller, Timo D; Tschöp, Matthias H; Hofmann, Susanna M; Mann, Matthias.

    In: Molecular Systems Biology, Vol. 15, e8793, 2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Proteomics reveals NNMT as a master metabolic regulator of cancer-associated fibroblasts. / Eckert, Mark A; Coscia, Fabian; Chryplewicz, Agnieszka; Chang, Jae Won; Hernandez, Kyle M; Pan, Shawn; Tienda, Samantha M; Nahotko, Dominik A; Li, Gang; Blaženović, Ivana; Lastra, Ricardo R; Curtis, Marion; Yamada, S Diane; Perets, Ruth; McGregor, Stephanie M; Andrade, Jorge; Fiehn, Oliver; Moellering, Raymond E; Mann, Matthias; Lengyel, Ernst.

    In: Nature, Vol. 569, No. 7758, 2019, p. 723-728.

    Research output: Contribution to journalLetterResearchpeer-review

  24. Published

    Proteomics-Based Comparative Mapping of the Secretomes of Human Brown and White Adipocytes Reveals EPDR1 as a Novel Batokine. / Deshmukh, Atul S; Peijs, Lone; Beaudry, Jacqueline L; Jespersen, Naja Z; Nielsen, Carsten H; Ma, Tao; Brunner, Andreas D; Larsen, Therese J.; Bayarri-Olmos, Rafael; Prabhakar, Bhargav S; Helgstrand, Charlotte; Severinsen, Mai C K; Holst, Birgitte; Kjaer, Andreas; Tang-Christensen, Mads; Sanfridson, Annika; Garred, Peter; Privé, Gilbert G; Pedersen, Bente K; Gerhart-Hines, Zachary; Nielsen, Søren; Drucker, Daniel J; Mann, Matthias; Scheele, Camilla.

    In: Cell Metabolism, Vol. 30, No. 5, 2019, p. 963-975.e7.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Replication-Coupled DNA-Protein Crosslink Repair by SPRTN and the Proteasome in Xenopus Egg Extracts. / Larsen, Nicolai B.; Gao, Alan O.; Sparks, Justin L; Gallina, Irene; Wu, R Alex; Mann, Matthias; Räschle, Markus; Walter, Johannes C; Duxin, Julien P.

    In: Molecular Cell, Vol. 73, No. 3, 2019, p. 574-588.e7.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    The CMG Helicase Bypasses DNA-Protein Cross-Links to Facilitate Their Repair. / Sparks, Justin L; Chistol, Gheorghe; Gao, Alan O.; Räschle, Markus; Larsen, Nicolai B.; Mann, Matthias; Duxin, Julien P.; Walter, Johannes C.

    In: Cell, Vol. 176, No. 1-2, 2019, p. 167-181.e21.

    Research output: Contribution to journalJournal articleResearchpeer-review

  27. Published

    The Case for Proteomics and Phospho-Proteomics in Personalized Cancer Medicine. / Doll, Sophia; Gnad, Florian; Mann, Matthias.

    In: Proteomics - Clinical Applications, Vol. 13, No. 2, e1800113, 2019.

    Research output: Contribution to journalReviewResearchpeer-review

  28. Published

    The ever expanding scope of electrospray mass spectrometry-a 30 year journey. / Mann, Matthias.

    In: Nature Communications, Vol. 10, 3744, 2019.

    Research output: Contribution to journalComment/debateResearch

  29. 2018
  30. PWWP2A binds distinct chromatin moieties and interacts with an MTA1-specific core NuRD complex. / Link, Stephanie; Spitzer, Ramona M M; Sana, Maryam; Torrado, Mario; Völker-Albert, Moritz C; Keilhauer, Eva C; Burgold, Thomas; Pünzeler, Sebastian; Low, Jason K K; Lindström, Ida; Nist, Andrea; Regnard, Catherine; Stiewe, Thorsten; Hendrich, Brian; Imhof, Axel; Mann, Matthias; Mackay, Joel P; Bartkuhn, Marek; Hake, Sandra B.

    In: Nature Communications, Vol. 9, No. 1, 16.10.2018, p. 4300.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. UBL3 modification influences protein sorting to small extracellular vesicles. / Ageta, Hiroshi; Ageta-Ishihara, Natsumi; Hitachi, Keisuke; Karayel, Ozge; Onouchi, Takanori; Yamaguchi, Hisateru; Kahyo, Tomoaki; Hatanaka, Ken; Ikegami, Koji; Yoshioka, Yusuke; Nakamura, Kenji; Kosaka, Nobuyoshi; Nakatani, Masashi; Uezumi, Akiyoshi; Ide, Tomihiko; Tsutsumi, Yutaka; Sugimura, Haruhiko; Kinoshita, Makoto; Ochiya, Takahiro; Mann, Matthias; Setou, Mitsutoshi; Tsuchida, Kunihiro.

    In: Nature Communications, Vol. 9, No. 1, 26.09.2018, p. 3936.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Phosphoproteomic approach for agonist-specific signaling in mouse brains : mTOR pathway is involved in κ opioid aversion. / Liu, Jeffrey J; Chiu, Yi-Ting; DiMattio, Kelly M; Chen, Chongguang; Huang, Peng; Gentile, Taylor A; Muschamp, John W; Cowan, Alan; Mann, Matthias; Liu-Chen, Lee-Yuan.

    In: Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology, 20.07.2018.

    Research output: Contribution to journalJournal articleResearchpeer-review

  33. Molecular and structural architecture of polyQ aggregates in yeast. / Gruber, Anselm; Hornburg, Daniel; Antonin, Matthias; Krahmer, Natalie; Collado, Javier; Schaffer, Miroslava; Zubaite, Greta; Lüchtenborg, Christian; Sachsenheimer, Timo; Brügger, Britta; Mann, Matthias; Baumeister, Wolfgang; Hartl, F Ulrich; Hipp, Mark S; Fernández-Busnadiego, Rubén.

    In: Proceedings of the National Academy of Sciences of the United States of America, 26.03.2018.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Compartment-resolved Proteomic Analysis of Mouse Aorta during Atherosclerotic Plaque Formation Reveals Osteoclast-specific Protein Expression. / Wierer, Michael; Prestel, Matthias; Schiller, Herbert; Yan, Guangyao; Schaab, Christoph; Azghandi, Sepiede; Werner, Julia; Kessler, Thorsten; Malik, Rainer; Murgia, Marta; Aherrahrou, Zouhair; Schunkert, Heribert; Dichgans, Martin; Mann, Matthias.

    In: Molecular and Cellular Proteomics, 02.2018.

    Research output: Contribution to journalJournal articleResearchpeer-review

  35. Development of phospho-specific Rab protein antibodies to monitor in vivo activity of the LRRK2 Parkinson's disease kinase. / Lis, Pawel; Burel, Sophie; Steger, Martin; Mann, Matthias; Brown, Fiona; Diez, Federico; Tonelli, Francesca; Holton, Janice L; Ho, Philip Winglok; Ho, Shu-Leong; Chou, Meng-Yun; Polinski, Nicole K; Martinez, Terina N; Davies, Paul; Alessi, Dario R.

    In: Biochemical Journal, Vol. 475, No. 1, 01.2018.

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Novel and shared neoantigen derived from histone 3 variant H3.3K27M mutation for glioma T cell therapy. / Chheda, Zinal S; Kohanbash, Gary; Okada, Kaori; Jahan, Naznin; Sidney, John; Pecoraro, Matteo; Yang, Xinbo; Carrera, Diego A; Downey, Kira M; Shrivastav, Shruti; Liu, Shuming; Lin, Yi; Lagisetti, Chetana; Chuntova, Pavlina; Watchmaker, Payal B; Mueller, Sabine; Pollack, Ian F; Rajalingam, Raja; Carcaboso, Angel M; Mann, Matthias; Sette, Alessandro; Garcia, K Christopher; Hou, Yafei; Okada, Hideho.

    In: The Journal of Experimental Medicine, Vol. 215, No. 1, 01.2018, p. 141-157.

    Research output: Contribution to journalJournal articleResearchpeer-review

  37. The non-classical nuclear import carrier Transportin 1 modulates circadian rhythms through its effect on PER1 nuclear localization. / Korge, Sandra; Maier, Bert; Brüning, Franziska; Ehrhardt, Lea; Korte, Thomas; Mann, Matthias; Herrmann, Andreas; Robles, Maria S; Kramer, Achim.

    In: P L o S Genetics, Vol. 14, No. 1, 01.2018, p. e1007189.

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. Published

    A novel LC system embeds analytes in pre-formed gradients for rapid, ultra-robust proteomics. / Bache, Nicolai; Geyer, Philipp E.; Bekker-Jensen, Dorte B.; Hørning, Ole; Falkenby, Lasse; Treit, Peter V.; Doll, Sophia; Paron, Igor; Müller, Johannes B.; Meier, Florian; Olsen, Jesper V.; Vorm, Ole; Mann, Matthias.

    In: Molecular and Cellular Proteomics, Vol. 17, No. 11, 2018, p. 2284-2296.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published

    BoxCar acquisition method enables single-shot proteomics at a depth of 10,000 proteins in 100 minutes. / Meier, Florian; Geyer, Philipp E.; Virreira Winter, Sebastian; Cox, Juergen; Mann, Matthias.

    In: Nature Methods, Vol. 15, No. 6, 2018, p. 440-448.

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Published

    Constructing a cell-type resolved human liver proteome atlas : THU-034. / Niu, L.; Geyer, P.; Mann, M.

    In: Journal of Hepatology, Vol. 68, 2018, p. S138-S139.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  41. Published

    EASI-tag enables accurate multiplexed and interference-free MS2-based proteome quantification. / Virreira Winter, Sebastian; Meier, Florian; Wichmann, Christoph; Cox, Juergen; Mann, Matthias; Meissner, Felix.

    In: Nature Methods, Vol. 15, No. 7, 2018, p. 527-530.

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    High-throughput and high-sensitivity phosphoproteomics with the EasyPhos platform. / Humphrey, Sean J.; Karayel, Ozge; James, David E.; Mann, Matthias.

    In: Nature Protocols (Print), Vol. 13, 2018, p. 1897-1916.

    Research output: Contribution to journalJournal articleResearchpeer-review

  43. Published

    In vivo brain GPCR signaling elucidated by phosphoproteomics. / Liu, Jeffrey J; Sharma, Kirti; Zangrandi, Luca; Chen, Chongguang; Humphrey, Sean J; Chiu, Yi-Ting; Spetea, Mariana; Liu-Chen, Lee-Yuan; Schwarzer, Christoph; Mann, Matthias.

    In: Science (New York, N.Y.), Vol. 360, No. 6395, 2018, p. 1-11.

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. In-depth proteomic analyses of (greenlip abalone) nacre and prismatic organic shell matrix. / Mann, Karlheinz; Cerveau, Nicolas; Gummich, Meike; Fritz, Monika; Mann, Matthias; Jackson, Daniel J.

    In: Proteome Science, Vol. 16, 2018, p. 11.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published

    Multi-level Proteomics Identifies CT45 as a Chemosensitivity Mediator and Immunotherapy Target in Ovarian Cancer. / Coscia, Fabian; Lengyel, Ernst; Duraiswamy, Jaikumar; Ashcroft, Bradley; Bassani-Sternberg, Michal; Wierer, Michael; Johnson, Alyssa; Wroblewski, Kristen; Montag, Anthony; Yamada, S Diane; López-Méndez, Blanca; Nilsson, Jakob; Mund, Andreas; Mann, Matthias; Curtis, Marion.

    In: Cell, Vol. 175, No. 1, 2018, p. 159-170.e16.

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    Online parallel accumulation - serial fragmentation (PASEF) with a novel trapped ion mobility mass spectrometer. / Meier, Florian; Brunner, Andreas-David; Koch, Scarlet; Koch, Heiner; Lubeck, Markus; Krause, Michael; Goedecke, Niels; Decker, Jens; Kosinski, Thomas; Park, Melvin A; Bache, Nicolai; Hoerning, Ole; Cox, Jürgen; Räther, Oliver; Mann, Matthias.

    In: Molecular and Cellular Proteomics, Vol. 17, No. 12, 2018, p. 2534-2545.

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    Organellar Proteomics and Phospho-Proteomics Reveal Subcellular Reorganization in Diet-Induced Hepatic Steatosis. / Krahmer, Natalie; Najafi, Bahar; Schueder, Florian; Quagliarini, Fabiana; Steger, Martin; Seitz, Susanne; Kasper, Robert; Salinas, Favio; Cox, Jürgen; Uhlenhaut, Nina Henriette; Walther, Tobias Christian; Jungmann, Ralf; Zeigerer, Anja; Borner, Georg Heinz Helmut; Mann, Matthias.

    In: Developmental Cell, Vol. 47, No. 2, 2018, p. 205-221.E7.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Plasma Proteome Profiling Reveals Dynamics of Inflammatory and Lipid Homeostasis Markers after Roux-En-Y Gastric Bypass Surgery. / Wewer Albrechtsen, Nicolai J; Geyer, Philipp E; Doll, Sophia; Treit, Peter V; Bojsen-Møller, Kirstine N; Martinussen, Christoffer; Jørgensen, Nils B; Torekov, Signe S; Meier, Florian; Niu, Lili; Santos, Alberto; Keilhauer, Eva C; Holst, Jens J; Madsbad, Sten; Mann, Matthias.

    In: Cell Systems, Vol. 7, No. 6, 2018, p. 601-612.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Proteomics for blood biomarker exploration of severe mental illness : pitfalls of the past and potential for the future. / Comes, Ashley L.; Papiol, Sergi; Mueller, Thorsten; Geyer, Philipp E.; Mann, Matthias; Schulze, Thomas G.

    In: Translational Psychiatry, Vol. 8, 160, 2018, p. 1-15.

    Research output: Contribution to journalReviewResearchpeer-review

  50. Published

    Quality control for plasma and cerebrospinal fluid samples using mass spectrometry. / Skotte, Nels H.; Geyer, Phillip E.; Steger, Martin; Treit, Peter V.; Voytik, Eugenia; Hellem, Marie N.; Nielsen, Jørgen E.; Mann, Matthias.

    In: Journal of Neurology, Neurosurgery and Psychiatry, Vol. 89, 2018, p. A31-A32.

    Research output: Contribution to journalConference abstract in journalResearch

  51. Published

    Rapid proteomic analysis for solid tumors reveals LSD1 as a drug target in an end-stage cancer patient. / Doll, Sophia; Kriegmair, Maximilian C.; Santos, Alberto; Wierer, Michael; Coscia, Fabian; Neil, Helen Michele; Porubsky, Stefan; Geyer, Philipp E.; Mund, Andreas; Nuhn, Philipp; Mann, Matthias.

    In: Molecular Oncology, Vol. 12, No. 8, 2018, p. 1296-1307.

    Research output: Contribution to journalJournal articleResearchpeer-review

  52. The Transcription Factor ETV1 Induces Atrial Remodeling and Arrhythmia. / Rommel, Carolin; Rösner, Stephan; Lother, Achim; Barg, Margareta; Schwaderer, Martin; Gilsbach, Ralf; Bömicke, Timo; Schnick, Tilman; Mayer, Sandra; Doll, Sophia; Hesse, Michael; Kretz, Oliver; Stiller, Brigitte; Neumann, Franz-Josef; Mann, Matthias; Krane, Markus; Fleischmann, Bernd K; Ravens, Ursula; Hein, Lutz.

    In: Circulation Research, Vol. 123, No. 5, 2018, p. 550-563.

    Research output: Contribution to journalJournal articleResearchpeer-review

  53. The hemicellulose-degrading enzyme system of the thermophilic bacterium Clostridium stercorarium : comparative characterisation and addition of new hemicellulolytic glycoside hydrolases. / Broeker, Jannis; Mechelke, Matthias; Baudrexl, Melanie; Mennerich, Denise; Hornburg, Daniel; Mann, Matthias; Schwarz, Wolfgang H; Liebl, Wolfgang; Zverlov, Vladimir V.

    In: Biotechnology for Biofuels, Vol. 11, 2018, p. 229.

    Research output: Contribution to journalJournal articleResearchpeer-review

  54. Published

    The proteome of prostate cancer bone metastasis reveals heterogeneity with prognostic implications. / Iglesias-Gato, Diego; Thysell, Elin; Tyanova, Stefka; Crnalic, Sead; Santos, Alberto; Lima, Thiago S.; Geiger, Tamar; Cox, Juergen; Widmark, Anders; Bergh, Anders; Mann, Matthias; Flores-Morales, Amilcar; Wikström, Pernilla.

    In: Clinical Cancer Research, Vol. 24, No. 21, 2018, p. 5433-5444.

    Research output: Contribution to journalJournal articleResearchpeer-review

  55. 2017
  56. Spatiotemporal Proteomic Profiling of Huntington's Disease Inclusions Reveals Widespread Loss of Protein Function. / Hosp, Fabian; Gutiérrez-Ángel, Sara; Schaefer, Martin H; Cox, Jürgen; Meissner, Felix; Hipp, Mark S; Hartl, F-Ulrich; Klein, Rüdiger; Dudanova, Irina; Mann, Matthias.

    In: Cell Reports, Vol. 21, No. 8, 21.11.2017, p. 2291-2303.

    Research output: Contribution to journalJournal articleResearchpeer-review

  57. Published

    Region and cell-type resolved quantitative proteomic map of the human heart. / Doll, Sophia; Dreßen, Martina; Geyer, Philipp E; Itzhak, Daniel N; Braun, Christian; Doppler, Stefanie A; Meier, Florian; Deutsch, Marcus-Andre; Lahm, Harald; Lange, Rüdiger; Krane, Markus; Mann, Matthias.

    In: Nature Communications, Vol. 8, No. 1, 1469, 13.11.2017.

    Research output: Contribution to journalJournal articleResearchpeer-review

  58. Systematic proteomic analysis of LRRK2-mediated Rab GTPase phosphorylation establishes a connection to ciliogenesis. / Steger, Martin; Diez, Federico; Dhekne, Herschel S; Lis, Pawel; Nirujogi, Raja S; Karayel, Ozge; Tonelli, Francesca; Martinez, Terina N; Lorentzen, Esben; Pfeffer, Suzanne R; Alessi, Dario R; Mann, Matthias.

    In: eLife, Vol. 6, 10.11.2017.

    Research output: Contribution to journalJournal articleResearchpeer-review

  59. Published

    A Primer on Concepts and Applications of Proteomics in Neuroscience. / Hosp, Fabian; Mann, Matthias.

    In: Neuron, Vol. 96, No. 3, 01.11.2017, p. 558-571.

    Research output: Contribution to journalReviewResearchpeer-review

  60. Published

    Circulating Glucagon 1-61 Regulates Blood Glucose by Increasing Insulin Secretion and Hepatic Glucose Production. / Albrechtsen, Nicolai J. Wewer; Kuhre, Rune E.; Hornburg, Daniel; Jensen, Christian Z.; Hornum, Mads; Dirksen, Carsten; Svane, Maria; Gasbjerg, Laerke S.; Jorgensen, Nils B.; Gabe, Maria N.; Balk-Moller, Emilie; Albrechtsen, Reidar; Winther-Sorensen, Marie; Galsgaard, Katrine D.; Meissner, Felix; Jorsal, Tina; Lund, Asger; Vilsboll, Tina; Eliasen, Rasmus; Bojsen-Moller, Kirstine N.; Idorn, Thomas; Deacon, Carolyn F.; Knop, Filip K.; Rosenkilde, Mette M.; Hartmann, Bolette; Feldt-Rasmussen, Bo; Mann, Matthias; Madsbad, Sten; Holst, Jens J.

    In: Cell Reports, Vol. 21, No. 6, 11.2017, p. 1452-1460.

    Research output: Contribution to journalJournal articleResearchpeer-review

  61. Published

    Why is it so difficult to measure glucagon-like peptide-1 in a mouse? / Windeløv, Johanne A; Wewer Albrechtsen, Nicolai J; Kuhre, Rune E; Jepsen, Sara L; Hornburg, Daniel; Pedersen, Jens; Jensen, Elisa P; Galsgaard, Katrine D; Winther-Sørensen, Marie; Ørgaard, Anne; Deacon, Carolyn F; Mann, Matthias; Kissow, Hannelouise; Hartmann, Bolette; Holst, Jens J.

    In: Diabetologia, Vol. 60, No. 10, 10.2017, p. 2066-2075.

    Research output: Contribution to journalJournal articleResearchpeer-review

  62. Published

    Revisiting biomarker discovery by plasma proteomics. / Geyer, Philipp E; Holdt, Lesca M; Teupser, Daniel; Mann, Matthias.

    In: Molecular Systems Biology, Vol. 13, No. 9, 942, 26.09.2017.

    Research output: Contribution to journalReviewResearchpeer-review

  63. A proteomic atlas of insulin signalling reveals tissue-specific mechanisms of longevity assurance. / Tain, Luke S; Sehlke, Robert; Jain, Chirag; Chokkalingam, Manopriya; Nagaraj, Nagarjuna; Essers, Paul; Rassner, Mark; Grönke, Sebastian; Froelich, Jenny; Dieterich, Christoph; Mann, Matthias; Alic, Nazif; Beyer, Andreas; Partridge, Linda.

    In: Molecular Systems Biology, Vol. 13, No. 9, 15.09.2017, p. 939.

    Research output: Contribution to journalJournal articleResearchpeer-review

  64. A Stat6/Pten Axis Links Regulatory T Cells with Adipose Tissue Function. / Kälin, Stefanie; Becker, Maike; Ott, Verena B; Serr, Isabelle; Hosp, Fabian; Mollah, Mohammad M H; Keipert, Susanne; Lamp, Daniel; Rohner-Jeanrenaud, Francoise; Flynn, Victoria K; Scherm, Martin G; Nascimento, Lucas F R; Gerlach, Katharina; Popp, Vanessa; Dietzen, Sarah; Bopp, Tobias; Krishnamurthy, Purna; Kaplan, Mark H; Serrano, Manuel; Woods, Stephen C; Tripal, Philipp; Palmisano, Ralf; Jastroch, Martin; Blüher, Matthias; Wolfrum, Christian; Weigmann, Benno; Ziegler, Anette-Gabriele; Mann, Matthias; Tschöp, Matthias H; Daniel, Carolin.

    In: Cell Metabolism, Vol. 26, No. 3, 05.09.2017, p. 475-492.e7.

    Research output: Contribution to journalJournal articleResearchpeer-review

  65. Multivalent binding of PWWP2A to H2A.Z regulates mitosis and neural crest differentiation. / Pünzeler, Sebastian; Link, Stephanie; Wagner, Gabriele; Keilhauer, Eva C; Kronbeck, Nina; Spitzer, Ramona Mm; Leidescher, Susanne; Markaki, Yolanda; Mentele, Edith; Regnard, Catherine; Schneider, Katrin; Takahashi, Daisuke; Kusakabe, Masayuki; Vardabasso, Chiara; Zink, Lisa M; Straub, Tobias; Bernstein, Emily; Harata, Masahiko; Leonhardt, Heinrich; Mann, Matthias; Rupp, Ralph Aw; Hake, Sandra B.

    In: E M B O Journal, Vol. 36, No. 15, 01.08.2017, p. 2263-2279.

    Research output: Contribution to journalJournal articleResearchpeer-review

  66. Single Muscle Fiber Proteomics Reveals Fiber-Type-Specific Features of Human Muscle Aging. / Murgia, Marta; Toniolo, Luana; Nagaraj, Nagarjuna; Ciciliot, Stefano; Vindigni, Vincenzo; Schiaffino, Stefano; Reggiani, Carlo; Mann, Matthias.

    In: Cell Reports, Vol. 19, No. 11, 13.06.2017, p. 2396-2409.

    Research output: Contribution to journalJournal articleResearchpeer-review

  67. H3.Y discriminates between HIRA and DAXX chaperone complexes and reveals unexpected insights into human DAXX-H3.3-H4 binding and deposition requirements. / Zink, Lisa-Maria; Delbarre, Erwan; Eberl, H Christian; Keilhauer, Eva C; Bönisch, Clemens; Pünzeler, Sebastian; Bartkuhn, Marek; Collas, Philippe; Mann, Matthias; Hake, Sandra B.

    In: Nucleic Acids Research, Vol. 45, No. 10, 02.06.2017, p. 5691-5706.

    Research output: Contribution to journalJournal articleResearchpeer-review

  68. Social network architecture of human immune cells unveiled by quantitative proteomics. / Rieckmann, Jan C; Geiger, Roger; Hornburg, Daniel; Wolf, Tobias; Kveler, Ksenya; Jarrossay, David; Sallusto, Federica; Shen-Orr, Shai S; Lanzavecchia, Antonio; Mann, Matthias; Meissner, Felix.

    In: Nature Immunology, Vol. 18, No. 5, 05.2017, p. 583-593.

    Research output: Contribution to journalJournal articleResearchpeer-review

  69. Published

    Loss-less Nano-fractionator for High Sensitivity, High Coverage Proteomics. / Kulak, Nils A; Geyer, Philipp E; Mann, Matthias.

    In: Molecular and Cellular Proteomics, Vol. 16, No. 4, 04.2017, p. 694-705.

    Research output: Contribution to journalJournal articleResearchpeer-review

  70. Lysine acetylation in mitochondria : From inventory to function. / Hosp, Fabian; Lassowskat, Ines; Santoro, Valeria; De Vleesschauwer, David; Fliegner, Daniela; Redestig, Henning; Mann, Matthias; Christian, Sven; Hannah, Matthew A; Finkemeier, Iris.

    In: Mitochondrion, Vol. 33, 03.2017, p. 58-71.

    Research output: Contribution to journalReviewResearchpeer-review

  71. Widespread Proteome Remodeling and Aggregation in Aging C. elegans. / Walther, Dirk M; Kasturi, Prasad; Zheng, Min; Pinkert, Stefan; Vecchi, Giulia; Ciryam, Prajwal; Morimoto, Richard I; Dobson, Christopher M; Vendruscolo, Michele; Mann, Matthias; Hartl, F Ulrich.

    In: Cell, Vol. 168, No. 5, 23.02.2017, p. 944.

    Research output: Contribution to journalJournal articleResearchpeer-review

  72. Phylointeractomics reconstructs functional evolution of protein binding. / Kappei, Dennis; Scheibe, Marion; Paszkowski-Rogacz, Maciej; Bluhm, Alina; Gossmann, Toni Ingolf; Dietz, Sabrina; Dejung, Mario; Herlyn, Holger; Buchholz, Frank; Mann, Matthias; Butter, Falk.

    In: Nature Communications, Vol. 8, 08.02.2017, p. 14334.

    Research output: Contribution to journalJournal articleResearchpeer-review

  73. CRL2(Lrr1) promotes unloading of the vertebrate replisome from chromatin during replication termination. / Dewar, James M; Low, Emily; Mann, Matthias; Räschle, Markus; Walter, Johannes C.

    In: Genes & Development, Vol. 31, No. 3, 01.02.2017, p. 275-290.

    Research output: Contribution to journalJournal articleResearchpeer-review

  74. Phosphorylation Is a Central Mechanism for Circadian Control of Metabolism and Physiology. / Robles, Maria S; Humphrey, Sean J; Mann, Matthias.

    In: Cell Metabolism, Vol. 25, No. 1, 10.01.2017, p. 118-127.

    Research output: Contribution to journalJournal articleResearchpeer-review

  75. Deep Proteome Profiling Reveals Common Prevalence of MZB1-positive Plasma B Cells in Human Lung and Skin Fibrosis. / Schiller, Herbert B; Mayr, Christoph H; Leuschner, Gabriela; Strunz, Maximilian; Staab-Weijnitz, Claudia; Preisendörfer, Stefan; Eckes, Beate; Moinzadeh, Pia; Krieg, Thomas; Schwartz, David A; Hatz, Rudolf A; Behr, Jürgen; Mann, Matthias; Eickelberg, Oliver.

    In: American Journal of Respiratory and Critical Care Medicine, Vol. 196, No. 10, 2017, p. 1298–1310.

    Research output: Contribution to journalJournal articleResearchpeer-review

  76. Lysine acetylome profiling uncovers novel histone deacetylase substrate proteins in Arabidopsis. / Hartl, Markus; Füßl, Magdalena; Boersema, Paul J.; Jost, Jan-Oliver; Kramer, Katharina; Bakirbas, Ahmet; Sindlinger, Julia; Plöchinger, Magdalena; Leister, Dario; Uhrig, Glen; Moorhead, Greg Bg; Cox, Jürgen; Salvucci, Michael E; Schwarzer, Dirk; Mann, Matthias; Finkemeier, Iris.

    In: Molecular Systems Biology, Vol. 13, No. 10, 949, 2017.

    Research output: Contribution to journalJournal articleResearchpeer-review

  77. 2016
  78. Published

    Proteomics reveals the effects of sustained weight loss on the human plasma proteome. / Geyer, Philipp E; Wewer Albrechtsen, Nicolai J; Tyanova, Stefka; Grassl, Niklas; Iepsen, Eva Pers Winning; Lundgren, Julie; Madsbad, Sten; Holst, Jens J; Torekov, Signe S; Mann, Matthias.

    In: Molecular Systems Biology, Vol. 12, 901, 22.12.2016.

    Research output: Contribution to journalJournal articleResearchpeer-review

  79. C9ORF72 interaction with cofilin modulates actin dynamics in motor neurons. / Sivadasan, Rajeeve; Hornburg, Daniel; Drepper, Carsten; Frank, Nicolas; Jablonka, Sibylle; Hansel, Anna; Lojewski, Xenia; Sterneckert, Jared; Hermann, Andreas; Shaw, Pamela J; Ince, Paul G; Mann, Matthias; Meissner, Felix; Sendtner, Michael.

    In: Nature Neuroscience, Vol. 19, No. 12, 12.2016, p. 1610-1618.

    Research output: Contribution to journalJournal articleResearchpeer-review

  80. Direct identification of clinically relevant neoepitopes presented on native human melanoma tissue by mass spectrometry. / Bassani-Sternberg, Michal; Bräunlein, Eva; Klar, Richard; Engleitner, Thomas; Sinitcyn, Pavel; Audehm, Stefan; Straub, Melanie; Weber, Julia; Slotta-Huspenina, Julia; Specht, Katja; Martignoni, Marc E; Werner, Angelika; Hein, Rüdiger; H Busch, Dirk; Peschel, Christian; Rad, Roland; Cox, Jürgen; Mann, Matthias; Krackhardt, Angela M.

    In: Nature Communications, Vol. 7, 21.11.2016, p. 13404.

    Research output: Contribution to journalJournal articleResearchpeer-review

  81. Glucose-regulated and drug-perturbed phosphoproteome reveals molecular mechanisms controlling insulin secretion. / Sacco, Francesca; Humphrey, Sean J; Cox, Jürgen; Mischnik, Marcel; Schulte, Anke; Klabunde, Thomas; Schäfer, Matthias; Mann, Matthias.

    In: Nature Communications, Vol. 7, 14.11.2016, p. 13250.

    Research output: Contribution to journalJournal articleResearchpeer-review

  82. Published

    SCAI promotes DNA double-strand break repair in distinct chromosomal contexts. / Hansen, Rebecca Kring; Mund, Andreas; Poulsen, Sara Lund; Sandoval, Maria; Klement, Karolin; Tsouroula, Katerina; Tollenaere, Maxim A X; Räschle, Markus; Soria, Rebeca; Offermanns, Stefan; Worzfeld, Thomas; Grosse, Robert; Brandt, Dominique T; Rozell, Björn; Mann, Matthias; Cole, Francesca; Soutoglou, Evi; Goodarzi, Aaron A; Daniel, Jeremy A; Mailand, Niels; Bekker-Jensen, Simon.

    In: Nature Cell Biology, Vol. 18, No. 12, 07.11.2016, p. 1357–1366.

    Research output: Contribution to journalLetterResearchpeer-review

  83. Published

    Activation of the ATR kinase by the RPA-binding protein ETAA1. / Haahr, Peter; Hoffmann, Saskia; Tollenaere, Maxim A X; Ho, Teresa; Toledo Lazaro, Luis Ignacio; Mann, Matthias; Bekker-Jensen, Simon; Räschle, Markus; Mailand, Niels.

    In: Nature Cell Biology, Vol. 18, No. 11, 11.2016, p. 1196–1207.

    Research output: Contribution to journalJournal articleResearchpeer-review

  84. Origins of mass spectrometry-based proteomics. / Mann, Matthias.

    In: Nature Reviews. Molecular Cell Biology, Vol. 17, No. 11, 11.2016, p. 678.

    Research output: Contribution to journalJournal articleResearchpeer-review

  85. L-Arginine Modulates T Cell Metabolism and Enhances Survival and Anti-tumor Activity. / Geiger, Roger; Rieckmann, Jan C; Wolf, Tobias; Basso, Camilla; Feng, Yuehan; Fuhrer, Tobias; Kogadeeva, Maria; Picotti, Paola; Meissner, Felix; Mann, Matthias; Zamboni, Nicola; Sallusto, Federica; Lanzavecchia, Antonio.

    In: Cell, Vol. 167, No. 3, 20.10.2016, p. 829-842.e13.

    Research output: Contribution to journalJournal articleResearchpeer-review

  86. Proteomics to study DNA-bound and chromatin-associated gene regulatory complexes. / Wierer, Michael; Mann, Matthias.

    In: Human Molecular Genetics, Vol. 25, No. R2, 01.10.2016, p. R106-R114.

    Research output: Contribution to journalJournal articleResearchpeer-review

  87. Published

    Mass-spectrometric exploration of proteome structure and function. / Aebersold, Ruedi; Mann, Matthias.

    In: Nature, Vol. 537, No. 7620, 15.09.2016, p. 347-55.

    Research output: Contribution to journalJournal articleResearchpeer-review

  88. Soluble Oligomers of PolyQ-Expanded Huntingtin Target a Multiplicity of Key Cellular Factors. / Kim, Yujin E; Hosp, Fabian; Frottin, Frédéric; Ge, Hui; Mann, Matthias; Hayer-Hartl, Manajit; Hartl, F Ulrich.

    In: Molecular Cell, Vol. 63, No. 6, 15.09.2016, p. 951-64.

    Research output: Contribution to journalJournal articleResearchpeer-review

  89. The Perseus computational platform for comprehensive analysis of (prote)omics data. / Tyanova, Stefka; Temu, Tikira; Sinitcyn, Pavel; Carlson, Arthur; Hein, Marco Y; Geiger, Tamar; Mann, Matthias; Cox, Jürgen.

    In: Nature Methods, Vol. 13, No. 9, 09.2016, p. 731-40.

    Research output: Contribution to journalJournal articleResearchpeer-review

  90. p53 down-regulates SARS coronavirus replication and is targeted by the SARS-unique domain and PLpro via E3 ubiquitin ligase RCHY1. / Ma-Lauer, Yue; Carbajo-Lozoya, Javier; Hein, Marco Y; Müller, Marcel A; Deng, Wen; Lei, Jian; Meyer, Benjamin; Kusov, Yuri; von Brunn, Brigitte; Bairad, Dev Raj; Hünten, Sabine; Drosten, Christian; Hermeking, Heiko; Leonhardt, Heinrich; Mann, Matthias; Hilgenfeld, Rolf; von Brunn, Albrecht.

    In: Proceedings of the National Academy of Sciences of the United States of America, Vol. 113, No. 35, 30.08.2016, p. E5192-201.

    Research output: Contribution to journalJournal articleResearchpeer-review

  91. Circular non-coding RNA ANRIL modulates ribosomal RNA maturation and atherosclerosis in humans. / Holdt, Lesca M; Stahringer, Anika; Sass, Kristina; Pichler, Garwin; Kulak, Nils A; Wilfert, Wolfgang; Kohlmaier, Alexander; Herbst, Andreas; Northoff, Bernd H; Nicolaou, Alexandros; Gäbel, Gabor; Beutner, Frank; Scholz, Markus; Thiery, Joachim; Musunuru, Kiran; Krohn, Knut; Mann, Matthias; Teupser, Daniel.

    In: Nature Communications, Vol. 7, 19.08.2016, p. 12429.

    Research output: Contribution to journalJournal articleResearchpeer-review

  92. HCD Fragmentation of Glycated Peptides. / Keilhauer, Eva C; Geyer, Philipp E; Mann, Matthias.

    In: Journal of Proteome Research, Vol. 15, No. 8, 05.08.2016, p. 2881-90.

    Research output: Contribution to journalJournal articleResearchpeer-review

  93. Glutathione peroxidase 3 localizes to the epithelial lining fluid and the extracellular matrix in interstitial lung disease. / Schamberger, Andrea C; Schiller, Herbert B; Fernandez, Isis E; Sterclova, Martina; Heinzelmann, Katharina; Hennen, Elisabeth; Hatz, Rudolf; Behr, Jürgen; Vašáková, Martina; Mann, Matthias; Eickelberg, Oliver; Staab-Weijnitz, Claudia A.

    In: Scientific Reports, Vol. 6, 20.07.2016, p. 29952.

    Research output: Contribution to journalJournal articleResearchpeer-review

  94. A Proteomics Approach to the Protein Normalization Problem : Selection of Unvarying Proteins for MS-Based Proteomics and Western Blotting. / Wiśniewski, Jacek R; Mann, Matthias.

    In: Journal of Proteome Research, Vol. 15, No. 7, 01.07.2016, p. 2321-6.

    Research output: Contribution to journalJournal articleResearchpeer-review

  95. PLEKHA7 Recruits PDZD11 to Adherens Junctions to Stabilize Nectins. / Guerrera, Diego; Shah, Jimit; Vasileva, Ekaterina; Sluysmans, Sophie; Méan, Isabelle; Jond, Lionel; Poser, Ina; Mann, Matthias; Hyman, Anthony A; Citi, Sandra.

    In: The Journal of Biological Chemistry, Vol. 291, No. 21, 20.05.2016, p. 11016-29.

    Research output: Contribution to journalJournal articleResearchpeer-review

  96. MicroRNAs of the miR-290-295 Family Maintain Bivalency in Mouse Embryonic Stem Cells. / Graham, Bryony; Marcais, Antoine; Dharmalingam, Gopuraja; Carroll, Thomas; Kanellopoulou, Chryssa; Graumann, Johannes; Nesterova, Tatyana B; Bermange, Anna; Brazauskas, Pijus; Xella, Barbara; Kriaucionis, Skirmantas; Higgs, Douglas R; Brockdorff, Neil; Mann, Matthias; Fisher, Amanda G; Merkenschlager, Matthias.

    In: Stem Cell Reports, Vol. 6, No. 5, 10.05.2016, p. 635-642.

    Research output: Contribution to journalJournal articleResearchpeer-review

  97. Homology-driven assembly of NOn-redundant protEin sequence sets (NOmESS) for mass spectrometry. / Temu, Tikira; Mann, Matthias; Räschle, Markus; Cox, Jürgen.

    In: Bioinformatics (Online), Vol. 32, No. 9, 01.05.2016, p. 1417-9.

    Research output: Contribution to journalJournal articleResearchpeer-review

  98. Molecular basis of PRC1 targeting to Polycomb response elements by PhoRC. / Frey, Felice; Sheahan, Thomas; Finkl, Katja; Stoehr, Gabriele; Mann, Matthias; Benda, Christian; Müller, Jürg.

    In: Genes & Development, Vol. 30, No. 9, 01.05.2016, p. 1116-27.

    Research output: Contribution to journalJournal articleResearchpeer-review

  99. Inflammatory signaling in human tuberculosis granulomas is spatially organized. / Marakalala, Mohlopheni J; Raju, Ravikiran M; Sharma, Kirti; Zhang, Yanjia J; Eugenin, Eliseo A; Prideaux, Brendan; Daudelin, Isaac B; Chen, Pei-Yu; Booty, Matthew G; Kim, Jin Hee; Eum, Seok Yong; Via, Laura E; Behar, Samuel M; Barry, Clifton E; Mann, Matthias; Dartois, Véronique; Rubin, Eric J.

    In: Nature Medicine, Vol. 22, No. 5, 05.2016, p. 531-8.

    Research output: Contribution to journalJournal articleResearchpeer-review

  100. Published
  101. Published

    The Proteome of Primary Prostate Cancer. / Iglesias-Gato, Diego; Wikström, Pernilla; Tyanova, Stefka; Lavallee, Charlotte; Thysell, Elin; Carlsson, Jessica; Hägglöf, Christina; Cox, Jürgen; Andrén, Ove; Stattin, Pär; Egevad, Lars; Widmark, Anders; Bjartell, Anders; Collins, Colin C; Bergh, Anders; Geiger, Tamar; Mann, Matthias; Flores-Morales, Amilcar.

    In: European Urology, Vol. 69, No. 5, 05.2016, p. 942-952.

    Research output: Contribution to journalJournal articleResearchpeer-review

  102. Published

    Ultra-deep and quantitative saliva proteome reveals dynamics of the oral microbiome. / Grassl, Niklas; Kulak, Nils Alexander; Pichler, Garwin; Geyer, Philipp Emanuel; Jung, Jette; Schubert, Sören; Sinitcyn, Pavel; Cox, Juergen; Mann, Matthias.

    In: Genome Medicine, Vol. 8, 44, 21.04.2016.

    Research output: Contribution to journalJournal articleResearchpeer-review

  103. Published

    C/EBPα creates elite cells for iPSC reprogramming by upregulating Klf4 and increasing the levels of Lsd1 and Brd4. / Di Stefano, Bruno; Collombet, Samuel; Jakobsen, Janus Schou; Wierer, Michael; Sardina, Jose Luis; Lackner, Andreas; Stadhouders, Ralph; Segura-Morales, Carolina; Francesconi, Mirko; Limone, Francesco; Mann, Matthias; Porse, Bo; Thieffry, Denis; Graf, Thomas.

    In: Nature Cell Biology, Vol. 18, No. 4, 04.2016, p. 371-81.

    Research output: Contribution to journalJournal articleResearchpeer-review

  104. Deep Proteomics of Breast Cancer Cells Reveals that Metformin Rewires Signaling Networks Away from a Pro-growth State. / Sacco, Francesca; Silvestri, Alessandra; Posca, Daniela; Pirrò, Stefano; Gherardini, Pier Federico; Castagnoli, Luisa; Mann, Matthias; Cesareni, Gianni.

    In: Cell Systems, Vol. 2, No. 3, 23.03.2016, p. 159-71.

    Research output: Contribution to journalJournal articleResearchpeer-review

Previous 1 2 3 Next

ID: 5650809