Matthias Mann

Matthias Mann

Research director, professor


  1. 2019
  2. Interconversion between Anticipatory and Active GID E3 Ubiquitin Ligase Conformations via Metabolically Driven Substrate Receptor Assembly. / Qiao, Shuai; Langlois, Christine R; Chrustowicz, Jakub; Sherpa, Dawafuti; Karayel, Ozge; Hansen, Fynn M; Beier, Viola; von Gronau, Susanne; Bollschweiler, Daniel; Schäfer, Tillman; Alpi, Arno F; Mann, Matthias; Prabu, J Rajan; Schulman, Brenda A.

    In: Molecular Cell, 01.11.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. SILAC-based quantitative mass spectrometry-based proteomics quantifies endoplasmic reticulum stress in whole HeLa cells. / Itzhak, Daniel N; Sacco, Francesca; Nagaraj, Nagarjuna; Tyanova, Stefka; Mann, Matthias; Murgia, Marta.

    In: Disease models & mechanisms, 18.10.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Sleep-wake cycles drive daily dynamics of synaptic phosphorylation. / Brüning, Franziska; Noya, Sara B; Bange, Tanja; Koutsouli, Stella; Rudolph, Jan D; Tyagarajan, Shiva K; Cox, Jürgen; Mann, Matthias; Brown, Steven A; Robles, Maria S.

    In: Science (New York, N.Y.), Vol. 366, No. 6462, eaav3617 , 11.10.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. The forebrain synaptic transcriptome is organized by clocks but its proteome is driven by sleep. / Noya, Sara B; Colameo, David; Brüning, Franziska; Spinnler, Andrea; Mircsof, Dennis; Opitz, Lennart; Mann, Matthias; Tyagarajan, Shiva K; Robles, Maria S; Brown, Steven A.

    In: Science (New York, N.Y.), Vol. 366, No. 6462, eaav2642 , 11.10.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. The Atherosclerosis Risk Variant rs2107595 Mediates Allele-Specific Transcriptional Regulation of HDAC9 via E2F3 and Rb1. / Prestel, Matthias; Prell-Schicker, Caroline; Webb, Tom; Malik, Rainer; Lindner, Barbara; Ziesch, Natalie; Rex-Haffner, Monika; Röh, Simone; Viturawong, Thanatip; Lehm, Manuel; Mokry, Michal; den Ruijter, Hester; Haitjema, Saskia; Asare, Yaw; Söllner, Flavia; Najafabadi, Maryam Ghaderi; Aherrahrou, Rédouane; Civelek, Mete; Samani, Nilesh J; Mann, Matthias; Haffner, Christof; Dichgans, Martin.

    In: Stroke, Vol. 50, No. 10, 10.2019, p. 2651-2660.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. E-pub ahead of print

    Metallopeptidase Inhibitor 1 (TIMP-1) promotes receptor tyrosine kinase c-Kit signaling in colorectal cancer. / Nordgaard, Cathrine; Doll, Sophia; Matos, Ana Laura de Souza Almeida; Høeberg, Mikkel; Kazi, Julhash Uddin; Friis, Stine; Stenvang, Jan; Rönnstrand, Lars; Mann, Matthias; Moreira, José Manuel Afonso.

    In: Molecular Oncology, 09.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. E-pub ahead of print

    Plasma Proteome Profiling to detect and avoid sample-related biases in biomarker studies. / Geyer, Philipp E.; Voytik, Eugenia; Treit, Peter V.; Doll, Sophia; Kleinhempel, Alisa; Niu, Lili; Müller, Johannes B; Buchholtz, Marie-Luise; Bader, Jakob M; Teupser, Daniel; Holdt, Lesca M; Mann, Matthias.

    In: EMBO Molecular Medicine, 09.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Key Features Relevant to Select Antigens and TCR From the MHC-Mismatched Repertoire to Treat Cancer. / Audehm, Stefan; Glaser, Manuel; Pecoraro, Matteo; Bräunlein, Eva; Mall, Sabine; Klar, Richard; Effenberger, Manuel; Albers, Julian; Bianchi, Henrique de Oliveira; Peper, Janet; Yusufi, Nahid; Busch, Dirk H; Stevanović, Stefan; Mann, Matthias; Antes, Iris; Krackhardt, Angela M.

    In: Frontiers in Immunology, Vol. 10, 1485, 28.06.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Fibro-adipogenic progenitors of dystrophic mice are insensitive to NOTCH regulation of adipogenesis. / Marinkovic, Milica; Fuoco, Claudia; Sacco, Francesca; Cerquone Perpetuini, Andrea; Giuliani, Giulio; Micarelli, Elisa; Pavlidou, Theodora; Petrilli, Lucia Lisa; Reggio, Alessio; Riccio, Federica; Spada, Filomena; Vumbaca, Simone; Zuccotti, Alessandro; Castagnoli, Luisa; Mann, Matthias; Gargioli, Cesare; Cesareni, Gianni.

    In: Life Science Alliance, Vol. 2, No. 3, 06.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Multi-omic Profiling Reveals Dynamics of the Phased Progression of Pluripotency. / Yang, Pengyi; Humphrey, Sean J; Cinghu, Senthilkumar; Pathania, Rajneesh; Oldfield, Andrew J; Kumar, Dhirendra; Perera, Dinuka; Yang, Jean Y H; James, David E; Mann, Matthias; Jothi, Raja.

    In: Cell Systems, Vol. 8, No. 5, 22.05.2019, p. 427-445.e10.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Cortical circuit alterations precede motor impairments in Huntington's disease mice. / Burgold, Johanna; Schulz-Trieglaff, Elena Katharina; Voelkl, Kerstin; Gutiérrez-Ángel, Sara; Bader, Jakob Maximilian; Hosp, Fabian; Mann, Matthias; Arzberger, Thomas; Klein, Rüdiger; Liebscher, Sabine; Dudanova, Irina.

    In: Scientific Reports, Vol. 9, No. 1, 29.04.2019, p. 6634.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Phosphoproteomics Reveals the GSK3-PDX1 Axis as a Key Pathogenic Signaling Node in Diabetic Islets. / Sacco, Francesca; Seelig, Anett; Humphrey, Sean J; Krahmer, Natalie; Volta, Francesco; Reggio, Alessio; Marchetti, Piero; Gerdes, Jantje; Mann, Matthias.

    In: Cell Metabolism, 07.03.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. A protein-interaction network of interferon-stimulated genes extends the innate immune system landscape. / Hubel, Philipp; Urban, Christian; Bergant, Valter; Schneider, William M; Knauer, Barbara; Stukalov, Alexey; Scaturro, Pietro; Mann, Angelika; Brunotte, Linda; Hoffmann, Heinrich H; Schoggins, John W; Schwemmle, Martin; Mann, Matthias; Rice, Charles M; Pichlmair, Andreas.

    In: Nature Immunology, 04.03.2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. An atlas of the aging lung mapped by single cell transcriptomics and deep tissue proteomics. / Angelidis, Ilias; Simon, Lukas M; Fernandez, Isis E; Strunz, Maximilian; Mayr, Christoph H; Greiffo, Flavia R; Tsitsiridis, George; Ansari, Meshal; Graf, Elisabeth; Strom, Tim-Matthias; Nagendran, Monica; Desai, Tushar; Eickelberg, Oliver; Mann, Matthias; Theis, Fabian J; Schiller, Herbert B.

    In: Nature Communications, Vol. 10, No. 1, 27.02.2019, p. 963.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Catching Lipid Droplet Contacts by Proteomics. / Krahmer, Natalie; Mann, Matthias.

    In: Contact, Vol. 2, 2019, p. 1-8.

    Research output: Contribution to journalReviewResearchpeer-review

  17. Published

    Efficient mitotic checkpoint signaling depends on integrated activities of Bub1 and the RZZ complex. / Zhang, Gang; Kruse, Thomas; Guasch Boldú, Claudia; Garvanska, Dimitriya H; Coscia, Fabian; Mann, Matthias; Barisic, Marin; Nilsson, Jakob.

    In: E M B O Journal, Vol. 38, No. 7, e100977, 2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    MaxQuant.Live enables global targeting of more than 25,000 peptides. / Wichmann, Christoph; Meier, Florian; Virreira Winter, Sebastian; Brunner, Andreas-David; Cox, Jürgen; Mann, Matthias.

    In: Molecular and Cellular Proteomics, Vol. 18, No. 5, 2019, p. 982-994.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Myosin binding protein H-like (MYBPHL) : a promising biomarker to predict atrial damage. / Lahm, Harald; Dressen, Martina; Beck, Nicole; Doppler, Stefanie; Deutsch, Marcus-Andre; Matsushima, Shunsuke; Neb, Irina; Koenig, Karl Christian; Sideris, Konstantinos; Voss, Stefanie; Eschenbach, Lena; Puluca, Nazan; Deisenhofer, Isabel; Doll, Sophia; Holdenrieder, Stefan; Mann, Matthias; Lange, Ruediger; Krane, Markus.

    In: Scientific Reports, Vol. 9, 9986, 2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    Plasma proteome profiling discovers novel proteins associated with non-alcoholic fatty liver disease. / Niu, Lili; Geyer, Philipp E.; Albrechtsen, Nicolai Jacob Wewer; Gluud, Lise L; Santos, Alberto; Doll, Sophia; Treit, Peter V; Holst, Jens J; Knop, Filip K; Vilsbøll, Tina; Junker, Anders; Sachs, Stephan; Stemmer, Kerstin; Müller, Timo D; Tschöp, Matthias H; Hofmann, Susanna M; Mann, Matthias.

    In: Molecular Systems Biology, Vol. 15, e8793, 2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Proteomics reveals NNMT as a master metabolic regulator of cancer-associated fibroblasts. / Eckert, Mark A; Coscia, Fabian; Chryplewicz, Agnieszka; Chang, Jae Won; Hernandez, Kyle M; Pan, Shawn; Tienda, Samantha M; Nahotko, Dominik A; Li, Gang; Blaženović, Ivana; Lastra, Ricardo R; Curtis, Marion; Yamada, S Diane; Perets, Ruth; McGregor, Stephanie M; Andrade, Jorge; Fiehn, Oliver; Moellering, Raymond E; Mann, Matthias; Lengyel, Ernst.

    In: Nature, Vol. 569, No. 7758, 2019, p. 723-728.

    Research output: Contribution to journalLetterResearchpeer-review

  22. Published

    Proteomics-Based Comparative Mapping of the Secretomes of Human Brown and White Adipocytes Reveals EPDR1 as a Novel Batokine. / Deshmukh, Atul S; Peijs, Lone; Beaudry, Jacqueline L; Jespersen, Naja Z; Nielsen, Carsten H; Ma, Tao; Brunner, Andreas D; Larsen, Therese J.; Bayarri-Olmos, Rafael; Prabhakar, Bhargav S; Helgstrand, Charlotte; Severinsen, Mai C K; Holst, Birgitte; Kjaer, Andreas; Tang-Christensen, Mads; Sanfridson, Annika; Garred, Peter; Privé, Gilbert G; Pedersen, Bente K; Gerhart-Hines, Zachary; Nielsen, Søren; Drucker, Daniel J; Mann, Matthias; Scheele, Camilla.

    In: Cell Metabolism, Vol. 30, No. 5, 2019, p. 963-975.e7.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Replication-Coupled DNA-Protein Crosslink Repair by SPRTN and the Proteasome in Xenopus Egg Extracts. / Larsen, Nicolai B.; Gao, Alan O.; Sparks, Justin L; Gallina, Irene; Wu, R Alex; Mann, Matthias; Räschle, Markus; Walter, Johannes C; Duxin, Julien P.

    In: Molecular Cell, Vol. 73, No. 3, 2019, p. 574-588.e7.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    The CMG Helicase Bypasses DNA-Protein Cross-Links to Facilitate Their Repair. / Sparks, Justin L; Chistol, Gheorghe; Gao, Alan O.; Räschle, Markus; Larsen, Nicolai B.; Mann, Matthias; Duxin, Julien P.; Walter, Johannes C.

    In: Cell, Vol. 176, No. 1-2, 2019, p. 167-181.e21.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    The Case for Proteomics and Phospho-Proteomics in Personalized Cancer Medicine. / Doll, Sophia; Gnad, Florian; Mann, Matthias.

    In: Proteomics - Clinical Applications, Vol. 13, No. 2, e1800113, 2019.

    Research output: Contribution to journalReviewResearchpeer-review

  26. Published

    The ever expanding scope of electrospray mass spectrometry-a 30 year journey. / Mann, Matthias.

    In: Nature Communications, Vol. 10, 3744, 2019.

    Research output: Contribution to journalComment/debateResearch

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