Finn Cilius Nielsen

Finn Cilius Nielsen

Clinical Professor


  1. 2019
  2. Published

    Deconvolution of autoencoders to learn biological regulatory modules from single cell mRNA sequencing data. / Kinalis, Savvas; Nielsen, Finn Cilius; Winther, Ole; Bagger, Frederik Otzen.

    In: BMC Bioinformatics, Vol. 20, 379, 2019.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. Published

    Elevated mir-9 in Cerebrospinal Fluid is Associated With Poor Functional Outcome After Subarachnoid Hemorrhage. / Bache, Søren; Rasmussen, Rune; Wolcott, Zoe; Rossing, Maria; Møgelvang, Rasmus; Tolnai, Daniel; Hassager, Christian; Forman, Julie Lyng; Køber, Lars; Nielsen, Finn Cilius; Kimberly, W. Taylor; Møller, Kirsten.

    In: Stroke, Vol. 50, No. Supplement 1, A149, 2019.

    Research output: Contribution to journalConference abstract in journalResearchpeer-review

  4. Published

    Whole genome sequencing of breast cancer. / Rossing, Maria; Sørensen, Claus Storgaard; Ejlertsen, Bent; Nielsen, Finn Cilius.

    In: APMIS - Journal of Pathology, Microbiology and Immunology, Vol. 127, No. 5, 2019, p. 303-315.

    Research output: Contribution to journalReviewResearchpeer-review

  5. 2018
  6. Published

    A Transcriptome-Wide Association Study Among 97,898 Women to Identify Candidate Susceptibility Genes for Epithelial Ovarian Cancer Risk. / et al.

    In: Cancer Research, Vol. 78, No. 18, 15.09.2018, p. 5419-5430.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. Published

    Characterization of basal-like subtype in a Danish consecutive primary breast cancer cohort. / Kinalis, Savvas; Nielsen, Finn Cilius; Talman, Maj Lis; Ejlertsen, Bent; Rossing, Maria.

    In: Acta Oncologica, Vol. 57, No. 1, 2018, p. 51-57.

    Research output: Contribution to journalJournal articleResearchpeer-review

  8. Published

    Circulating tumor DNA as a marker of treatment response in BRAF V600E mutated non-melanoma solid tumors. / Ahlborn, Lise Barlebo; Tuxen, Ida Viller; Mouliere, Florent; Kinalis, Savvas; Schmidt, Ane Y; Rohrberg, Kristoffer Staal; Santoni-Rugiu, Eric; Nielsen, Finn Cilius; Lassen, Ulrik; Yde, Christina Westmose; Oestrup, Olga; Mau-Sorensen, Morten.

    In: OncoTarget, Vol. 9, No. 66, 2018, p. 32570-32579.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Deep sequencing of human papillomavirus positive loco-regionally advanced oropharyngeal squamous cell carcinomas reveals novel mutational signature. / Grønhøj, Christian; Jensen, David H; Agander, Tina; Kiss, Katalin; Høgdall, Estrid; Specht, Lena; Bagger, Frederik Otzen; Nielsen, Finn Cilius; von Buchwald, Christian.

    In: BMC Cancer, Vol. 18, No. 1, 640, 2018, p. 1-10.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    Genomic alterations accompanying tumour evolution in colorectal cancer : tracking the differences between primary tumours and synchronous liver metastases by whole-exome sequencing. / Mogensen, M B; Rossing, M; Østrup, O; Larsen, P N; Heiberg Engel, P J; Jørgensen, L N; Hogdall, E V; Eriksen, J; Ibsen, P; Jess, P; Grauslund, M; Nielsen, H J; Nielsen, F C; Vainer, B; Osterlind, K.

    In: BMC Cancer, Vol. 18, 752, 2018.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. Published

    Importance of comprehensive molecular profiling for clinical outcome in children with recurrent cancer. / Østrup, Olga; Nysom, Karsten; Scheie, David; Schmidt, Ane Y.; Mathiasen, Rene; Hjalgrim, Lisa L.; Olsen, Tina E.; Skjøth-Rasmussen, Jane; Henriksen, Birthe M.; Nielsen, Finn C.; Wehner, Peder S.; Schrøder, Henrik; Sehested, Astrid M.; Rechnitzer, Catherine; Rossing, Maria.

    In: Frontiers in Pediatrics, Vol. 6, 114, 2018.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    Incidence and prevalence of multiple endocrine neoplasia 2a in denmark 1901–2014 : A nationwide study. / Mathiesen, Jes Sloth; Kroustrup, Jens Peter; Vestergaard, Peter; Stochholm, Kirstine; Poulsen, Per Løgstrup; Rasmussen, Åse Krogh; Feldt-Rasmussen, Ulla; Schytte, Sten; Pedersen, Henrik Baymler; Hahn, Christoffer Holst; Bentzen, Jens; Möller, Sören; Gaustadnes, Mette; Rossing, Maria; Nielsen, Finn Cilius; Brixen, Kim; Frederiksen, Anja Lisbeth; Godballe, Christian.

    In: Clinical Epidemiology, Vol. 10, 2018, p. 1479-1487.

    Research output: Contribution to journalJournal articleResearchpeer-review

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ID: 6797