Large-scale association analysis identifies new lung cancer susceptibility loci and heterogeneity in genetic susceptibility across histological subtypes

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Large-scale association analysis identifies new lung cancer susceptibility loci and heterogeneity in genetic susceptibility across histological subtypes. / McKay, James D.; Hung, Rayjean J.; Han, Younghun; Zong, Xuchen; Carreras-Torres, Robert; Christiani, David C.; Caporaso, Neil E.; Johansson, Mattias; Xiao, Xiangjun; Li, Yafang; Byun, Jinyoung; Dunning, Alison; Pooley, Karen A.; Qian, David C.; Ji, Xuemei; Liu, Geoffrey; Timofeeva, Maria N.; Bojesen, Stig E.; Wu, Xifeng; Marchand, Loic Le; Albanes, Demetrios; Bickeböller, Heike; Aldrich, Melinda C.; Bush, William S.; Tardon, Adonina; Rennert, Gad; Teare, M. Dawn; Field, John K.; Kiemeney, Lambertus A.; Lazarus, Philip; Haugen, Aage; Lam, Stephen; Schabath, Matthew B.; Andrew, Angeline S.; Shen, Hongbing; Hong, Yun Chul; Yuan, Jian Min; Bertazzi, Pier Alberto; Pesatori, Angela C.; Ye, Yuanqing; Diao, Nancy; Su, Li; Zhang, Ruyang; Brhane, Yonathan; Leighl, Natasha; Johansen, Jakob S.; Mellemgaard, Anders; Saliba, Walid; Haiman, Christopher A.; Wilkens, Lynne R.; SpiroMeta Consortium; Rafnar, Thorunn; Thorgeirsson, Thorgeir E; Reginsson, Gunnar W.; Brennan, Paul; Landi, Maria Teresa; Amos, Christopher I.

In: Nature Genetics, Vol. 49, No. 7, 2017, p. 1126-1132.

Research output: Contribution to journalLetterResearchpeer-review

Harvard

McKay, JD, Hung, RJ, Han, Y, Zong, X, Carreras-Torres, R, Christiani, DC, Caporaso, NE, Johansson, M, Xiao, X, Li, Y, Byun, J, Dunning, A, Pooley, KA, Qian, DC, Ji, X, Liu, G, Timofeeva, MN, Bojesen, SE, Wu, X, Marchand, LL, Albanes, D, Bickeböller, H, Aldrich, MC, Bush, WS, Tardon, A, Rennert, G, Teare, MD, Field, JK, Kiemeney, LA, Lazarus, P, Haugen, A, Lam, S, Schabath, MB, Andrew, AS, Shen, H, Hong, YC, Yuan, JM, Bertazzi, PA, Pesatori, AC, Ye, Y, Diao, N, Su, L, Zhang, R, Brhane, Y, Leighl, N, Johansen, JS, Mellemgaard, A, Saliba, W, Haiman, CA, Wilkens, LR, SpiroMeta Consortium, Rafnar, T, Thorgeirsson, TE, Reginsson, GW, Brennan, P, Landi, MT & Amos, CI 2017, 'Large-scale association analysis identifies new lung cancer susceptibility loci and heterogeneity in genetic susceptibility across histological subtypes', Nature Genetics, vol. 49, no. 7, pp. 1126-1132. https://doi.org/10.1038/ng.3892

APA

McKay, J. D., Hung, R. J., Han, Y., Zong, X., Carreras-Torres, R., Christiani, D. C., Caporaso, N. E., Johansson, M., Xiao, X., Li, Y., Byun, J., Dunning, A., Pooley, K. A., Qian, D. C., Ji, X., Liu, G., Timofeeva, M. N., Bojesen, S. E., Wu, X., ... Amos, C. I. (2017). Large-scale association analysis identifies new lung cancer susceptibility loci and heterogeneity in genetic susceptibility across histological subtypes. Nature Genetics, 49(7), 1126-1132. https://doi.org/10.1038/ng.3892

Vancouver

McKay JD, Hung RJ, Han Y, Zong X, Carreras-Torres R, Christiani DC et al. Large-scale association analysis identifies new lung cancer susceptibility loci and heterogeneity in genetic susceptibility across histological subtypes. Nature Genetics. 2017;49(7):1126-1132. https://doi.org/10.1038/ng.3892

Author

McKay, James D. ; Hung, Rayjean J. ; Han, Younghun ; Zong, Xuchen ; Carreras-Torres, Robert ; Christiani, David C. ; Caporaso, Neil E. ; Johansson, Mattias ; Xiao, Xiangjun ; Li, Yafang ; Byun, Jinyoung ; Dunning, Alison ; Pooley, Karen A. ; Qian, David C. ; Ji, Xuemei ; Liu, Geoffrey ; Timofeeva, Maria N. ; Bojesen, Stig E. ; Wu, Xifeng ; Marchand, Loic Le ; Albanes, Demetrios ; Bickeböller, Heike ; Aldrich, Melinda C. ; Bush, William S. ; Tardon, Adonina ; Rennert, Gad ; Teare, M. Dawn ; Field, John K. ; Kiemeney, Lambertus A. ; Lazarus, Philip ; Haugen, Aage ; Lam, Stephen ; Schabath, Matthew B. ; Andrew, Angeline S. ; Shen, Hongbing ; Hong, Yun Chul ; Yuan, Jian Min ; Bertazzi, Pier Alberto ; Pesatori, Angela C. ; Ye, Yuanqing ; Diao, Nancy ; Su, Li ; Zhang, Ruyang ; Brhane, Yonathan ; Leighl, Natasha ; Johansen, Jakob S. ; Mellemgaard, Anders ; Saliba, Walid ; Haiman, Christopher A. ; Wilkens, Lynne R. ; SpiroMeta Consortium ; Rafnar, Thorunn ; Thorgeirsson, Thorgeir E ; Reginsson, Gunnar W. ; Brennan, Paul ; Landi, Maria Teresa ; Amos, Christopher I. / Large-scale association analysis identifies new lung cancer susceptibility loci and heterogeneity in genetic susceptibility across histological subtypes. In: Nature Genetics. 2017 ; Vol. 49, No. 7. pp. 1126-1132.

Bibtex

@article{a559f44716fe435e829bad02ac139fee,
title = "Large-scale association analysis identifies new lung cancer susceptibility loci and heterogeneity in genetic susceptibility across histological subtypes",
abstract = "Although several lung cancer susceptibility loci have been identified, much of the heritability for lung cancer remains unexplained. Here 14,803 cases and 12,262 controls of European descent were genotyped on the OncoArray and combined with existing data for an aggregated genome-wide association study (GWAS) analysis of lung cancer in 29,266 cases and 56,450 controls. We identified 18 susceptibility loci achieving genome-wide significance, including 10 new loci. The new loci highlight the striking heterogeneity in genetic susceptibility across the histological subtypes of lung cancer, with four loci associated with lung cancer overall and six loci associated with lung adenocarcinoma. Gene expression quantitative trait locus (eQTL) analysis in 1,425 normal lung tissue samples highlights RNASET2, SECISBP2L and NRG1 as candidate genes. Other loci include genes such as a cholinergic nicotinic receptor, CHRNA2, and the telomere-related genes OFBC1 and RTEL1. Further exploration of the target genes will continue to provide new insights into the etiology of lung cancer.",
author = "McKay, {James D.} and Hung, {Rayjean J.} and Younghun Han and Xuchen Zong and Robert Carreras-Torres and Christiani, {David C.} and Caporaso, {Neil E.} and Mattias Johansson and Xiangjun Xiao and Yafang Li and Jinyoung Byun and Alison Dunning and Pooley, {Karen A.} and Qian, {David C.} and Xuemei Ji and Geoffrey Liu and Timofeeva, {Maria N.} and Bojesen, {Stig E.} and Xifeng Wu and Marchand, {Loic Le} and Demetrios Albanes and Heike Bickeb{\"o}ller and Aldrich, {Melinda C.} and Bush, {William S.} and Adonina Tardon and Gad Rennert and Teare, {M. Dawn} and Field, {John K.} and Kiemeney, {Lambertus A.} and Philip Lazarus and Aage Haugen and Stephen Lam and Schabath, {Matthew B.} and Andrew, {Angeline S.} and Hongbing Shen and Hong, {Yun Chul} and Yuan, {Jian Min} and Bertazzi, {Pier Alberto} and Pesatori, {Angela C.} and Yuanqing Ye and Nancy Diao and Li Su and Ruyang Zhang and Yonathan Brhane and Natasha Leighl and Johansen, {Jakob S.} and Anders Mellemgaard and Walid Saliba and Haiman, {Christopher A.} and Wilkens, {Lynne R.} and {SpiroMeta Consortium} and Thorunn Rafnar and Thorgeirsson, {Thorgeir E} and Reginsson, {Gunnar W.} and Paul Brennan and Landi, {Maria Teresa} and Amos, {Christopher I}",
year = "2017",
doi = "10.1038/ng.3892",
language = "English",
volume = "49",
pages = "1126--1132",
journal = "Nature Genetics",
issn = "1061-4036",
publisher = "nature publishing group",
number = "7",

}

RIS

TY - JOUR

T1 - Large-scale association analysis identifies new lung cancer susceptibility loci and heterogeneity in genetic susceptibility across histological subtypes

AU - McKay, James D.

AU - Hung, Rayjean J.

AU - Han, Younghun

AU - Zong, Xuchen

AU - Carreras-Torres, Robert

AU - Christiani, David C.

AU - Caporaso, Neil E.

AU - Johansson, Mattias

AU - Xiao, Xiangjun

AU - Li, Yafang

AU - Byun, Jinyoung

AU - Dunning, Alison

AU - Pooley, Karen A.

AU - Qian, David C.

AU - Ji, Xuemei

AU - Liu, Geoffrey

AU - Timofeeva, Maria N.

AU - Bojesen, Stig E.

AU - Wu, Xifeng

AU - Marchand, Loic Le

AU - Albanes, Demetrios

AU - Bickeböller, Heike

AU - Aldrich, Melinda C.

AU - Bush, William S.

AU - Tardon, Adonina

AU - Rennert, Gad

AU - Teare, M. Dawn

AU - Field, John K.

AU - Kiemeney, Lambertus A.

AU - Lazarus, Philip

AU - Haugen, Aage

AU - Lam, Stephen

AU - Schabath, Matthew B.

AU - Andrew, Angeline S.

AU - Shen, Hongbing

AU - Hong, Yun Chul

AU - Yuan, Jian Min

AU - Bertazzi, Pier Alberto

AU - Pesatori, Angela C.

AU - Ye, Yuanqing

AU - Diao, Nancy

AU - Su, Li

AU - Zhang, Ruyang

AU - Brhane, Yonathan

AU - Leighl, Natasha

AU - Johansen, Jakob S.

AU - Mellemgaard, Anders

AU - Saliba, Walid

AU - Haiman, Christopher A.

AU - Wilkens, Lynne R.

AU - SpiroMeta Consortium

AU - Rafnar, Thorunn

AU - Thorgeirsson, Thorgeir E

AU - Reginsson, Gunnar W.

AU - Brennan, Paul

AU - Landi, Maria Teresa

AU - Amos, Christopher I

PY - 2017

Y1 - 2017

N2 - Although several lung cancer susceptibility loci have been identified, much of the heritability for lung cancer remains unexplained. Here 14,803 cases and 12,262 controls of European descent were genotyped on the OncoArray and combined with existing data for an aggregated genome-wide association study (GWAS) analysis of lung cancer in 29,266 cases and 56,450 controls. We identified 18 susceptibility loci achieving genome-wide significance, including 10 new loci. The new loci highlight the striking heterogeneity in genetic susceptibility across the histological subtypes of lung cancer, with four loci associated with lung cancer overall and six loci associated with lung adenocarcinoma. Gene expression quantitative trait locus (eQTL) analysis in 1,425 normal lung tissue samples highlights RNASET2, SECISBP2L and NRG1 as candidate genes. Other loci include genes such as a cholinergic nicotinic receptor, CHRNA2, and the telomere-related genes OFBC1 and RTEL1. Further exploration of the target genes will continue to provide new insights into the etiology of lung cancer.

AB - Although several lung cancer susceptibility loci have been identified, much of the heritability for lung cancer remains unexplained. Here 14,803 cases and 12,262 controls of European descent were genotyped on the OncoArray and combined with existing data for an aggregated genome-wide association study (GWAS) analysis of lung cancer in 29,266 cases and 56,450 controls. We identified 18 susceptibility loci achieving genome-wide significance, including 10 new loci. The new loci highlight the striking heterogeneity in genetic susceptibility across the histological subtypes of lung cancer, with four loci associated with lung cancer overall and six loci associated with lung adenocarcinoma. Gene expression quantitative trait locus (eQTL) analysis in 1,425 normal lung tissue samples highlights RNASET2, SECISBP2L and NRG1 as candidate genes. Other loci include genes such as a cholinergic nicotinic receptor, CHRNA2, and the telomere-related genes OFBC1 and RTEL1. Further exploration of the target genes will continue to provide new insights into the etiology of lung cancer.

U2 - 10.1038/ng.3892

DO - 10.1038/ng.3892

M3 - Letter

C2 - 28604730

AN - SCOPUS:85020451435

VL - 49

SP - 1126

EP - 1132

JO - Nature Genetics

JF - Nature Genetics

SN - 1061-4036

IS - 7

ER -

ID: 188713314