Rasmus Kjøller

Rasmus Kjøller

Associate Professor


  1. Published

    The UNITE database for molecular identification of fungi - recent updates and future perspectives

    Abarenkov, K., Nilsson, R. H., Larsson, K., Alexander, I. J., Eberhardt, U., Erland, S., Høiland, K., Kjøller, Rasmus, Larsson, E., Pennanen, T., Sen, R., Taylor, A. F. S., Tedersoo, L., Ursing, B. M., Vrålstad, T., Liimatainen, K., Peintner, U. & Kõljalg, U., Apr 2010, In: New Phytologist. 186, 2, p. 281-285

    Research output: Contribution to journalJournal articlepeer-review

  2. Published

    Naturpligt skal sikre mere og vildere natur i Danmark

    Baaner, Lasse, Bruun, Hans Henrik, Vejre, Henrik, Møller, Peter Rask, Båstrup-Spohr, Lars, Krøijer, Stine, Larsen, K. C., Kjøller, Rasmus, Strange, Niels, Jepsen, Martin Rudbeck & Heilmann-Clausen, Jacob, 3 Jun 2022, Altinget.dk.

    Research output: Other contributionNet publication - Internet publicationCommunication

  3. Published

    The distance decay of similarity in communities of ectomycorrhizal fungi in different ecosystems and scales

    Bahram, M., Koljalg, U., Courty, P., Diedhiou, A. G., Kjøller, Rasmus, Polme, S., Ryberg, M., Veldre, V. & Tedersoo, L., 2013, In: Journal of Ecology. 101, 5, p. 1335-1344 10 p.

    Research output: Contribution to journalJournal articlepeer-review

  4. Published

    Total RNA sequencing reveals multilevel microbial community changes and functional responses to wood ash application in agricultural and forest soil

    Bang-Andreasen, T., Anwar, M. Z., Lanzén, A., Kjøller, Rasmus, Rønn, R., Ekelund, Flemming & Jacobsen, C. S., 2020, In: FEMS Microbiology Ecology. 96, 3, 13 p., fiaa016.

    Research output: Contribution to journalJournal articlepeer-review

  5. Published

    Wood ash induced pH changes strongly affect soil bacterial numbers and community composition

    Bang-Andreasen, T., Nielsen, J. T., Voriskova, J., Heise, J., Rønn, R., Kjøller, Rasmus, Hansen, Hans Chr. Bruun & Jacobsen, C. S., 2017, In: Frontiers in Microbiology. 8, 14 p., 1400.

    Research output: Contribution to journalJournal articlepeer-review

  6. Published

    Application of wood ash leads to strong vertical gradients in soil pH changing prokaryotic community structure in forest top soil

    Bang-Andreasen, T., Peltre, M., Ellegaard-Jensen, L., Hansen, Lars Hestbjerg, Ingerslev, Morten, Rønn, R., Jacobsen, C. S. & Kjøller, Rasmus, 2021, In: Scientific Reports. 11, 10 p., 742.

    Research output: Contribution to journalJournal articlepeer-review

  7. Published

    Preserving Accuracy in GenBank

    Bruns, T. D., Blackwell, M., Edwards, I., Taylor, A. F. S., Horton, T., Zhang, N., Kõljalg, U., May, G., Kuyper, T. W., Bever, J. D., Gilbert, G., Taylor, J. W., DeSantis, T. Z., Pringle, A., Borneman, J., Thorn, G., Berbee, M., Mueller, G. M., Andersen, G. L., Vellinga, E. C. & 236 others, Branco, S., Anderson, I., Dickie, I. A., Avis, P., Timonen, S., Kjøller, Rasmus, Lodge, D. J., Bateman, R. M., Purvis, A., Crous, P. W., Hawkes, C., Barraclough, T., Burt, A., Nilsson, R. H., Larsson, K., Alexander, I., Moncalvo, J., Berube, J., Spatafora, J., Thorsten Lumbsch, H., Blair, J. E., Suh, S., Pfister, D. H., Binder, M., Boehm, E. W., Kohn, L., Mata, J. L., Dyer, P., Sung, G., Dentinger, B., Simmons, E. G., Baird, R. E., Volk, T. J., Perry, B. A., Kerrigan, R. W., Campbell, J., Rajesh, J., Reynolds, D. R., Geiser, D., Humber, R. A., Hausmann, N., Szaro, T., Stajich, J., Gathman, A., Peay, K. G., Henkel, T., Robinson, C. H., Pukkila, P. J., Nguyen, N. H., Villalta, C., Kennedy, P., Bergemann, S., Catherine Aime, M., Kauff, F., Porras-Alfaro, A., Gueidan, C., Beck, A., Andersen, B., Marek, S., Crouch, J. A., Kerrigan, J., Beagle Ristaino, J., Hodge, K. T., Kuldau, G., Samuels, G. J., Raja, H. A., Voglmayr, H., Gardes, M., Janos, D. P., Rogers, J. D., Cannon, P., Woolfolk, S. W., Kistler, H. C., Castellano, M. A., Maldonado-Ramírez, S. L., Kirk, P. M., Farrar, J. J., Osmundson, T., Currah, R. S., Vujanovic, V., Chen, W., Korf, R. P., Atallah, Z. K., Harrison, K. J., Guarro, J., Bates, S. T., Enrico Bonello, P., Bridge, P., Schell, W., Rossi, W., Stenlid, J., Frisvad, J. C., Miller, R. M., Baker, S. E., Hallen, H. E., Janso, J. E., Wilson, A. W., Conway, K. E., Egerton-Warburton, L., Wang, Z., Eastburn, D., Ho, W. W. H., Kroken, S., Stadler, M., Turgeon, G., Lichtwardt, R. W., Stewart, E. L., Wedin, M., Li, D., Uchida, J. Y., Jumpponen, A., Deckert, R. J., Beker, H. J., Rogers, S. O., Xu, J., Johnston, P., Shoemaker, R. A., Liu, M., Marques, G., Summerell, B., Sokolski, S., Thrane, U., Widden, P., Bruhn, J. N., Bianchinotti, V., Tuthill, D., Baroni, T. J., Barron, G., Hosaka, K., Jewell, K., Piepenbring, M., Sullivan, R., Griffith, G. W., Bradley, S. G., Aoki, T., Yoder, W. T., Ju, Y., Berch, S. M., Trappe, M., Duan, W., Bonito, G., Taber, R. A., Coelho, G., Bills, G., Ganley, A., Agerer, R., Nagy, L., Roy, B. A., Læssøe, Thomas, Hallenberg, N., Tichy, H., Stalpers, J., Langer, E., Scholler, M., Krueger, D., Pacioni, G., Pöder, R., Pennanen, T., Capelari, M., Nakasone, K., Tewari, J. P., Miller, A. N., Decock, C., Huhndorf, S., Wach, M., Vishniac, H. S., Yohalem, D. S., Smith, M. E., Glenn, A. E., Spiering, M., Lindner, D. L., Schoch, C., Redhead, S. A., Ivors, K., Jeffers, S. N., Geml, J., Okafor, F., Spiegel, F. W., Dewsbury, D., Carroll, J., Porter, T. M., Pashley, C., Carpenter, S. E., Abad, G., Voigt, K., Arenz, B., Methven, A. S., Schechter, S., Vance, P., Mahoney, D., Kang, S., Rheeder, J. P., Mehl, J., Greif, M., Ndzi Ngala, G., Ammirati, J., Kawasaki, M., Gwo-Fang, Y., Matsumoto, T., Smith, D., Koenig, G., Luoma, D., May, T., Leonardi, M., Sigler, L., Taylor, D. L., Gibson, C., Sharpton, T., Hawksworth, D. L., Carmine Dianese, J., Trudell, S. A., Paulus, B., Padamsee, M., Callac, P., Lima, N., White, M., Barreau, C., Juncai, M. A., Buyck, B., Rabeler, R. K., Liles, M. R., Estes, D., Carter, R., Herr, J. M., Chandler, G., Kerekes, J., Cruse-Sanders, J., Galán Márquez, R., Horak, E., Fitzsimons, M., Döring, H., Yao, S., Hynson, N., Ryberg, M., Arnold, A. E. & Hughes, K., 2008, In: Science. 319, 5870, p. 1616 1 p.

    Research output: Contribution to journalLetterpeer-review

  8. Published

    Interactions between indigenous arbuscular mycorrhizal fungi and Aphanomyces euteiches in field-grown pea

    Bødker, L., Kjøller, Rasmus, Kristensen, K. & Rosendahl, Søren, 2002, In: Mycorrhiza. 12, 1, p. 7-12 6 p.

    Research output: Contribution to journalJournal articlepeer-review

  9. Published

    Effect of phosphate and the arbuscular mycorrhizal fungus Glomus intraradices on disease severity of root rot of peas ( Pisum sativum ) caused by Aphanomyces euteiches

    Bødker, L., Kjøller, Rasmus & Rosendahl, Søren, 1998, In: Mycorrhiza. 8, 3, p. 169-174 5 p.

    Research output: Contribution to journalJournal articlepeer-review

  10. Published

    Risk assessment of replacing conventional P fertilizers with biomass ash: residual effects on plant yield, nutrition, cadmium accumulation and mycorrhizal status

    Cruz Paredes, C., Lopez Garcia, A., Rubæk, G. H., Hovmand, Mads Frederik, Sørensen, P. & Kjøller, Rasmus, 2017, In: Science of the Total Environment. 575, p. 1168-1176 9 p.

    Research output: Contribution to journalJournal articlepeer-review

  11. Published

    Suppression of arbuscular mycorrhizal fungal activity in a diverse collection of non-cultivated soils

    Cruz Paredes, C., Svenningsen, N. B., Nybroe, O., Kjøller, Rasmus, Frøslev, Tobias Guldberg & Jakobsen, Iver, Mar 2019, In: FEMS Microbiology Ecology. 95, 3, p. 1-10 fiz020.

    Research output: Contribution to journalJournal articlepeer-review

  12. Published

    Using community trait-distributions to assign microbial responses to pH changes and Cd in forest soils treated with wood ash

    Cruz Paredes, C., Wallander, H., Kjøller, Rasmus & Rousk, J., Sep 2017, In: Soil Biology and Biochemistry. 112, p. 153-164 12 p.

    Research output: Contribution to journalJournal articlepeer-review

  13. Published

    Bacteria Respond Stronger Than Fungi Across a Steep Wood Ash-Driven pH Gradient

    Cruz-Paredes, C., Bang-Andreasen, T., Christensen, Søren, Ekelund, Flemming, Frøslev, Tobias Guldberg, Jacobsen, C. S., Johansen, Jesper Liengaard, Mortensen, Louise Hindborg, Rønn, R., Vestergård, M. & Kjøller, Rasmus, 2021, In: Frontiers in Forests and Global Change. 4, 10 p., 781844.

    Research output: Contribution to journalJournal articlepeer-review

  14. Published

    Wood ash application in a managed Norway spruce plantation did not affect ectomycorrhizal diversity or N retention capacity

    Cruz-Paredes, C., Frøslev, Tobias Guldberg, Michelsen, Anders, Bang-Andreasen, T., Hansen, M., Ingerslev, Morten, Skov, Simon, Wallander, H. & Kjøller, Rasmus, 2019, In: Fungal Ecology. 39, p. 1-11 11 p.

    Research output: Contribution to journalJournal articlepeer-review

  15. Published

    Uniquity: a general metric for biotic uniqueness of sites

    Ejrnæs, R., Frøslev, Tobias Guldberg, Høye, T. T., Kjøller, Rasmus, Oddershede, A., Brunbjerg, A. K., Hansen, Anders Johannes & Bruun, Hans Henrik, 2018, In: Biological Conservation. 225, p. 98-105 8 p.

    Research output: Contribution to journalJournal articlepeer-review

  16. Published

    The production and turnover of extramatrical mycelium of ectomycorrhizal fungi in forest soils: role in carbon cycling

    Ekblad, A., Wallander, H., Godbold, D. L., Cruz, C., Johnson, D., Baldrian, P., Björk, R. G., Epron, D., Kieliszewska-Rokicka, B., Kjøller, Rasmus, Kraigher, H., Matzner, E., Neumann, J. & Plassard, C., 2013, In: Plant and Soil. 366, p. 1-27 27 p.

    Research output: Contribution to journalJournal articlepeer-review

  17. Published

    Cadmium accumulation in organisms from a spruce plantation amended with wood ash - an environmental risk?

    Ekelund, Flemming, Cruz-Paredes, C., Jørgensen, Christian Hviid Friis, Vestergård, M., Rasmussen, K. R., Mortensen, Louise Hindborg, Kindtler, Nikolaj Lunding, Rønn, R., Christensen, Søren, Johansen, Jesper Liengaard & Kjøller, Rasmus, 2024, In: Trees, Forests and People. 15, 6 p., 100499.

    Research output: Contribution to journalJournal articlepeer-review

  18. Published
  19. Published

    Algorithm for post-clustering curation of DNA amplicon data yields reliable biodiversity estimates

    Frøslev, Tobias Guldberg, Kjøller, Rasmus, Bruun, Hans Henrik, Ejrnæs, R., Brunbjerg, A. K., Pietroni, Carlotta & Hansen, Anders Johannes, 30 Oct 2017, In: Nature Communications. 8, 1, 11 p., 1188.

    Research output: Contribution to journalJournal articlepeer-review

  20. Published

    Molecular phylogenetics and delimitation of species in Cortinarius section Calochroi (Basidiomycota, Agaricales) in Europe

    Frøslev, Tobias Guldberg, Jeppesen, T. S., Læssøe, Thomas & Kjøller, Rasmus, 2007, In: Molecular Phylogenetics and Evolution. 44, 1, p. 217-227 11 p.

    Research output: Contribution to journalJournal articlepeer-review

  21. Published

    Treated like dirt: Robust forensic and ecological inferences from soil eDNA after challenging sample storage

    Frøslev, Tobias Guldberg, Ejrnæs, R., Hansen, Anders Johannes, Bruun, Hans Henrik, Nielsen, Ida Broman, Ekelund, Flemming, Vestergård, M. & Kjøller, Rasmus, 2023, In: Environmental DNA. 5, 1, p. 158-174 17 p.

    Research output: Contribution to journalJournal articlepeer-review

  22. Published

    Community structure and diversity of below ground ectomycorrhizal fungi in Danish beech (Fagus sylvatica) forest with different cropping history

    Føns, K. & Kjøller, Rasmus, 2003.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  23. Published

    Soil fungal diversity and functionality are driven by plant species used in phytoremediation

    Gil-Martínez, M., López-García, Á., Domínguez, M. T., Kjøller, Rasmus, Navarro-Fernández, C. M., Rosendahl, Søren & Marañón, T., 2021, In: Soil Biology and Biochemistry. 153, 12 p., 108102.

    Research output: Contribution to journalJournal articlepeer-review

  24. Published

    Ectomycorrhizal Fungal Communities and Their Functional Traits Mediate Plant-Soil Interactions in Trace Element Contaminated Soils

    Gil-Martínez, M., López-García, Á., Dominguez, M. T., Navarro-Fernández, C. M., Kjøller, Rasmus, Tibbett, M. & Marañón, T., 2018, In: Frontiers in Plant Science. 9, p. 1-15 1682.

    Research output: Contribution to journalJournal articlepeer-review

  25. Published

    A comparison between ITS phylogenetic relationships and morphological species recognition within Mycena sect. Calodontes in Northern Europe

    Harder, C., Læssøe, Thomas, Kjøller, Rasmus & Frøslev, Tobias Guldberg, 2010, In: Mycological Progress. 9, 3

    Research output: Contribution to journalJournal articlepeer-review

  26. Published

    A three-gene phylogeny of the Mycena pura complex reveals 11 phylogenetic species and shows ITS to be unreliable for species identification

    Harder, Christoffer Bugge, Læssøe, Thomas, Frøslev, T. G., Ekelund, Flemming, Rosendahl, Søren & Kjøller, Rasmus, 2013, In: Fungal Biology. 117, 11-12, p. 764-775 12 p.

    Research output: Contribution to journalJournal articlepeer-review

  27. Published

    Extension of Plant Phenotypes by the Foliar Microbiome

    Hawkes, C. V., Kjøller, Rasmus, Raaijmakers, J. M., Riber, Leise, Christensen, Svend, Rasmussen, Simon, Christensen, Jan H., Dahl, A. B., Westergaard, Jesper Cairo, Nielsen, Mads, Brown-Guedira, G. & Hansen, Lars Hestbjerg, 2021, In: Annual Review of Plant Biology. 72, p. 823-846 24 p.

    Research output: Contribution to journalJournal articlepeer-review

  28. Published

    Tree species traits and mycorrhizal association shape soil microbial communities via litter quality and species mediated soil properties

    Heděnec, P., Zheng, H., Siqueira, D. P., Lin, Q., Peng, Y., Schmidt, Inger Kappel, Frøslev, Tobias Guldberg, Kjøller, Rasmus, Rousk, J. & Vesterdal, Lars, 2023, In: Forest Ecology and Management. 527, 15 p., 120608.

    Research output: Contribution to journalJournal articlepeer-review

  29. Published

    Litter chemistry of common European tree species drives the feeding preference and consumption rate of soil invertebrates, and shapes the diversity and structure of gut and faecal microbiomes

    Heděnec, P., Zheng, H., Siqueira, D. P., Peng, Y., Schmidt, Inger Kappel, Frøslev, Tobias Guldberg, Kjøller, Rasmus, Li, H., Frouz, J. & Vesterdal, Lars, 2023, In: Soil Biology and Biochemistry. 177, 13 p., 108918.

    Research output: Contribution to journalJournal articlepeer-review

  30. Published

    Taxonomy of Tricholoma in northern Europe based on ITS sequence data and morphological characters

    Heilmann-Clausen, Jacob, Christensen, M., Frøslev, Tobias Guldberg & Kjøller, Rasmus, Jun 2017, In: Persoonia. 38, p. 38-57 20 p.

    Research output: Contribution to journalJournal articlepeer-review

  31. Published

    Towards standardization of the description and publication of next-generation sequencing datasets of fungal communities

    Henrik Nilsson, R., Tedersoo, L., Lindahl, B. D., Kjøller, Rasmus, Carlsen, T., Quince, C., Abarenkov, K., Pennanen, T., Stenlid, J., Bruns, T., Larsson, K., Kõljalg, U. & Kauserud, H., 2011, In: New Phytologist. 191, 2, p. 314-8 5 p.

    Research output: Contribution to journalJournal articlepeer-review

  32. Published

    Toward a function-first framework to make soil microbial ecology predictive

    Hicks, L. C., Frey, B., Kjøller, Rasmus, Lukac, M., Moora, M., Weedon, J. T. & Rousk, J., 2022, In: Ecology. 103, 2, 9 p., e03594.

    Research output: Contribution to journalJournal articlepeer-review

  33. Published

    Øvelsesvejledning til Svampebiologi

    Jensen, B., Kjøller, Rasmus & Rosendahl, Søren, 2003, Svampeafdelingen, Botanisk Institut. 43 p.

    Research output: Book/ReportCompendium/lecture notes

  34. Published

    Mycorrhizal features and leaf traits covary at the community level during primary succession

    Jespersen, J. R. P., Johansen, Jesper Liengaard, Maciel Rabelo Pereira, C., Bruun, Hans Henrik, Rosendahl, Søren, Kjøller, Rasmus & Lopez Garcia, A., 2019, In: Fungal Ecology. 40, p. 4-11

    Research output: Contribution to journalJournal articlepeer-review

  35. Published

    The complexity of wood ash fertilization disentangled: Effects on soil pH, nutrient status, plant growth and cadmium accumulation

    Johansen, Jesper Liengaard, Nielsen, M. L., Vestergård, M., Mortensen, Louise Hindborg, Cruz-Paredes, C., Rønn, R., Kjøller, Rasmus, Hovmand, Mads Frederik, Christensen, Søren & Ekelund, Flemming, 2021, In: Environmental and Experimental Botany. 185, 9 p., 104424.

    Research output: Contribution to journalJournal articlepeer-review

  36. Published

    Pesticider ændrer markens stofkredsløb. Fungicider hæmmer livet i jorden

    Johnsen, K. E., Thirup, L., Ekelund, Flemming, Kjøller, Rasmus, Krogh, P., Jakobsen, I. & Schweiger, P., 2000, In: Naturens Verden. p. 6-10

    Research output: Contribution to journalJournal article

  37. Published

    TRY plant trait database - enhanced coverage and open access

    Kjøller, Rasmus & TRY Plant Trait Consortium, T. P. T. C., 2020, In: Global Change Biology. 26, 1, p. 119-188

    Research output: Contribution to journalJournal articlepeer-review

  38. Published

    Wood ash effects on growth and cadmium uptake in Deschampsia flexuosa (Wavy hair-grass)

    Kindtler, Nikolaj Lunding, Ekelund, Flemming, Rønn, R., Kjøller, Rasmus, Hovmand, Mads Frederik, Vestergård, M., Christensen, Søren & Johansen, Jesper Liengaard, 2019, In: Environmental Pollution. p. 886-893 8 p.

    Research output: Contribution to journalJournal articlepeer-review

  39. Published

    Co-existing ericaceous plant species in a subarctic mire community share fungal root endophytes

    Kjøller, Rasmus, Olsrud, M. & Michelsen, Anders, Aug 2010, In: Fungal Ecology. 3, 3, p. 205-214 10 p.

    Research output: Contribution to journalJournal articlepeer-review

  40. Published

    Disproportionate abundance between ectomycorrhizal root tips and their associated mycelia.

    Kjøller, Rasmus, 2006, In: FEMS Microbiology Ecology. 58, 2, p. 214-24 10 p.

    Research output: Contribution to journalJournal articlepeer-review

  41. Published

    Rhizopogon spore bank communities within and among California pine forests

    Kjøller, Rasmus & Bruns, T. D., 2003, In: Mycologia. 95, p. 603-613

    Research output: Contribution to journalJournal articlepeer-review

  42. Published

    Seasonal fluctuations in the ectomycorrhizal community associated with beech (Fagus sylvatica)

    Kjøller, Rasmus, 2003.

    Research output: Contribution to conferenceConference abstract for conferenceResearch

  43. Published

    The impact of liming on ectomycorrhizal fungal communities in coniferous forests in Southern Sweden

    Kjøller, Rasmus & Clemmensen, K., 2008, Skogsstyrelsens Förlag Jönköping, Sweden: Skogsstyrelsen förlag. 70 p.

    Research output: Book/ReportReportpeer-review

  44. Published

    Belowground ectomycorrhizal fungal communities respond to liming in three southern Swedish coniferous forest stands

    Kjøller, Rasmus & Clemmensen, K., 2009, In: Forest Ecology and Management. 257, 11, p. 2217-2225

    Research output: Contribution to journalJournal articlepeer-review

  45. Published

    Polyacrylamide gel electrophoresis (PAGE) and densitometric measurement of enzyme activity of the pea root pathogen Aphanomyces euteiches in pea roots

    Kjøller, Rasmus & Rosendahl, Søren, 1997, In: J. Phytopathol.-Phytopathol. Z.. 145, p. 253-256

    Research output: Contribution to journalJournal articlepeer-review

  46. Published

    Detection of arbuscular mycorrhizal fungi (Glomales) in roots by nested PCR and SSCP (Single Stranded Conformation Polymorphism)

    Kjøller, Rasmus & Rosendahl, Søren, 2000, In: Plant and Soil. 226, p. 189-196

    Research output: Contribution to journalJournal articlepeer-review

  47. Published

    Molecular diversity of glomalean (arbuscular mycorrhizal) fungi determined as distinct Glomus specific DNA sequences from roots of field grown peas

    Kjøller, Rasmus & Rosendahl, Søren, 2001, In: Mycological Research. 105, p. 1027-1032

    Research output: Contribution to journalJournal articlepeer-review

  48. Published

    Svampene - et kompendium i mykologi til bachelorstudiet i biologi.

    Kjøller, Rasmus, Læssøe, Thomas, Rosendahl, Søren & Søchting, Ulrik, 2003, Svampeafdelingen, Botanisk Institut. 95 p.

    Research output: Book/ReportCompendium/lecture notes

  49. Published

    Ectomycorrhizal Fungal Responses to Forest Liming and Wood Ash Addition: Review and Meta-analysis

    Kjøller, Rasmus, Cruz-Paredes, C. & Clemmensen, K. E., 2017, Soil Biological Communities and Ecosystem Resilience . Lukac, M., Grenni, P. & Gamboni, M. (eds.). Springer, Vol. 4. p. 223-252 (Sustainability in Plant and Crop Protection).

    Research output: Chapter in Book/Report/Conference proceedingBook chapterResearchpeer-review

  50. Published
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