Chuna Ram Choudhary

Chuna Ram Choudhary

Professor, Group Leader, Professor

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    ORCID: 0000-0002-9863-433X

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    1. Published

      Specificity and commonality of the phosphoinositide-binding proteome analyzed by quantitative mass spectrometry

      Jungmichel, S., Sylvestersen, K. B., Choudhary, Chunaram, Nguyen, S., Mann, Matthias & Nielsen, Michael Lund, 13 Feb 2014, In: Cell Reports. 6, 3, p. 578-91 14 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    2. Published

      Histone Acetyltransferase MOF Blocks Acquisition of Quiescence in Ground-State ESCs through Activating Fatty Acid Oxidation

      Khoa, L. T. P., Tsan, Y., Mao, F., Kremer, D. M., Sajjakulnukit, P., Zhang, L., Zhou, B., Tong, X., Bhanu, N. V., Choudhary, Chunaram, Garcia, B. A., Yin, L., Smith, G. D., Saunders, T. L., Bielas, S. L., Lyssiotis, C. A. & Dou, Y., 2020, In: Cell Stem Cell. 27, 3, p. 441-458.e10 29 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    3. Identification of a novel activating mutation (Y842C) within the activation loop of FLT3 in patients with acute myeloid leukemia (AML)

      Kindler, T., Breitenbuecher, F., Kasper, S., Estey, E., Giles, F., Feldman, E., Ehninger, G., Schiller, G., Klimek, V., Nimer, S. D., Gratwohl, A., Choudhary, Chunaram, Mueller-Tidow, C., Serve, H., Gschaidmeier, H., Cohen, P. S., Huber, C. & Fischer, T., 2005, In: Blood. 105, 1, p. 335-40 6 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    4. Published

      Discovery of a selective catalytic p300/CBP inhibitor that targets lineage-specific tumours

      Lasko, L. M., Jakob, C. G., Edalji, R. P., Qiu, W., Montgomery, D., Digiammarino, E. L., Hansen, T. M., Risi, R. M., Frey, R., Manaves, V., Shaw, B., Algire, M., Hessler, P., Lam, L. T., Uziel, T., Faivre, E., Ferguson, D., Buchanan, F. G., Martin, R. L., Torrent, M. & 16 others, Chiang, G. G., Karukurichi, K., Langston, J. W., Weinert, B. T., Choudhary, Chunaram, de Vries, P., Van Drie, J. H., McElligott, D., Kesicki, E., Marmorstein, R., Sun, C., Cole, P. A., Rosenberg, S. H., Michaelides, M. R., Lai, A. & Bromberg, K. D., 5 Oct 2017, In: Nature. 550, 7674, p. 128-132 5 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    5. Published

      HDAC6 modulates myofibril stiffness and diastolic function of the heart

      Lin, Y., Major, J. L., Liebner, Tim, Hourani, Z., Travers, J. G., Wennersten, S. A., Haefner, K. R., Cavasin, M. A., Wilson, C. E., Jeong, M. Y., Han, Y., Gotthardt, M., Ferguson, S. K., Ambardekar, A. V., Lam, M. P., Choudhary, Chunaram, Granzier, H. L., Woulfe, K. C. & McKinsey, T. A., 2022, In: Journal of Clinical Investigation. 132, 10, 14 p., e148333.

      Research output: Contribution to journal › Journal article › Research › peer-review

    6. Published

      Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns

      Lundby, Alicia, Hansen, K. L., Weinert, B. T., Breinholt Bekker-Jensen, D., Secher, A., Skovgaard, T., Kelstrup, C., Dmytriyev, A., Choudhary, Chunaram, Lundby, C. & Olsen, Jesper Velgaard, 30 Aug 2012, In: Cell Reports. 2, 2, p. 419-431 13 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    7. Published

      HBO1 is required for the maintenance of leukaemia stem cells

      MacPherson, L., Anokye, J., Yeung, M. M., Lam, E. Y. N., Chan, Y-C., Weng, C-F., Yeh, P., Knezevic, K., Butler, M. S., Hoegl, A., Chan, K-L., Burr, M. L., Gearing, L. J., Willson, T., Liu, J., Choi, J., Yang, Y., Bilardi, R. A., Falk, H., Nghi Nguyen & 28 others, Stupple, P. A., Peat, T. S., Zhang, M., De Silva, M., Carrasco-Pozo, C., Avery, V. M., Khoo, S., Dolezal, O., Dennis, M. L., Nuttall, S., Surjadi, R., Newman, J., Ren, B., Leaver, D. J., Sun, Y., Baell, J. B., Dovey, O., Vassiliou, G. S., Grebien, F., Dawson, S., Street, I. P., Monahan, B. J., Burns, C. J., Choudhary, Chunaram, Blewitt, M. E., Voss, A. K., Thomas, T. & Dawson, M. A., 2020, In: Nature. 577, 7789, p. 266-270

      Research output: Contribution to journal › Journal article › Research › peer-review

    8. Published

      DVC1 (C1orf124) is a DNA damage-targeting p97 adaptor that promotes ubiquitin-dependent responses to replication blocks

      Mosbech, A., Gibbs-Seymour, I., Kagias, K., Thorslund, T., Beli, P., Povlsen, L., Nielsen, S. V., Smedegaard, S., Sedgwick, G., Lukas, Claudia, Hartmann-Petersen, Rasmus, Lukas, Jiri, Choudhary, Chunaram, Pocock, R. D. J., Bekker-Jensen, Simon Holst & Mailand, Niels, 2012, In: Nature Structural and Molecular Biology. 19, 11, p. 1084-92 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    9. Published

      Proteome dynamics at broken replication forks reveal a distinct ATM-directed repair response suppressing DNA double-strand break ubiquitination

      Nakamura, K., Kustatscher, G., Alabert, C., Hödl, M., Forne, I., Völker-Albert, M., Satpathy, S., Beyer, T. E., Mailand, Niels, Choudhary, Chunaram, Imhof, A., Rappsilber, J. & Groth, Anja, 2021, In: Molecular Cell. 81, 3, 23 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    10. Published

      Acetylation of histone H2B marks active enhancers and predicts CBP/p300 target genes

      Narita, Takeo, Higashijima, Y., Kilic, Sinan, Liebner, Tim, Walter, Jonas & Choudhary, Chunaram, 2023, In: Nature Genetics. 55, p. 679-692

      Research output: Contribution to journal › Journal article › Research › peer-review

    11. Published

      Enhancers are activated by p300/CBP activity-dependent PIC assembly, RNAPII recruitment, and pause release

      Narita, Takeo, Ito, S., Higashijima, Y., Chu, W. K., Neumann, K., Walter, Jonas, Satpathy, S., Liebner, Tim, Hamilton, W. B., Maskey, E., Prus, G., Shibata, M., Iesmantavicius, V., Brickman, Joshua Mark, Anastassiadis, K., Koseki, H. & Choudhary, Chunaram, 2021, In: Molecular Cell. 81, 10, p. 2166-2182.e6

      Research output: Contribution to journal › Journal article › Research › peer-review

    12. Published

      Functions and mechanisms of non-histone protein acetylation

      Narita, Takeo, Weinert, B. T. & Choudhary, Chunaram, 2019, In: Nature Reviews. Molecular Cell Biology. 20, p. 156-174 19 p.

      Research output: Contribution to journal › Review › Research › peer-review

    13. Published

      Deubiquitylating enzyme USP9x regulates hippo pathway activity by controlling angiomotin protein turnover

      Nguyen, T. H., Andrejeva, Diana, Gupta, R., Choudhary, Chunaram, Hong, X., Eichhorn, P. J., Loya, Anand Chainsukh & Cohen, S. M., 29 Mar 2016, In: Cell Discovery. 2, 13 p., 16001.

      Research output: Contribution to journal › Journal article › Research › peer-review

    14. Published

      UBL5 is essential for pre-mRNA splicing and sister chromatid cohesion in human cells

      Oka, Y., Varmark, H., Vitting-Seerup, K., Beli, P., Waage, J. E., Hakobyan, A., Mistrik, M., Choudhary, Chunaram, Rohde, M., Bekker-Jensen, Simon Holst & Mailand, Niels, 2014, In: E M B O Reports. 15, 9, p. 956-964 9 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    15. Published

      Mte1 interacts with Mph1 and promotes crossover recombination and telomere maintenance

      Pinela da Silva, S. C., Altmannova, V., Luke-Glaser, S., Henriksen, P., Gallina, I., Yang, X., Choudhary, Chunaram, Luke, B., Krejci, L. & Lisby, Michael, 2016, In: Genes & Development. 30, 6, p. 700-717 18 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    16. Published

      RNF111/Arkadia is a SUMO-targeted ubiquitin ligase that facilitates the DNA damage response

      Poulsen, S. L., Hansen, R. K., Wagner, S. A., van Cuijk, L., van Belle, G. J., Streicher, W., Wikström, M., Choudhary, Chunaram, Houtsmuller, A. B., Marteijn, J. A., Bekker-Jensen, Simon Holst & Mailand, Niels, 10 Jun 2013, In: Journal of Cell Biology. 201, 6, p. 797-807 11 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    17. Published

      Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass

      Povlsen, L. K., Beli, P., Wagner, S. A., Poulsen, S. L., Sylvestersen, K. B., Poulsen, J. W., Nielsen, Michael Lund, Bekker-Jensen, Simon Holst, Mailand, Niels & Choudhary, Chunaram, Oct 2012, In: Nature Cell Biology. 14, 10, p. 1089-98 10 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    18. Published

      Analysis and Interpretation of Protein Post-Translational Modification Site Stoichiometry

      Prus, Gabriela Zofia, Hoegl, A., Weinert, B. T. & Choudhary, Chunaram, 2019, In: Trends in Biochemical Sciences. 44, 11, p. 943-960

      Research output: Contribution to journal › Review › Research › peer-review

    19. Published

      SOCS1 cooperates with FLT3-ITD in the development of myeloproliferative disease by promoting the escape from external cytokine control

      Reddy, P. N. G., Serve, H., Brandts, C. H., Sargin, B., Choudhary, Chunaram, Müller-Tidow, C., Berdel, W. E., Stein, S. & Grez, M., 23 Aug 2012, In: Blood. 120, 8, p. 1691-1702 12 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    20. Published

      Acetylation of intrinsically disordered regions regulates phase separation

      Saito, M., Hess, D., Eglinger, J., Fritsch, A. W., Kreysing, M., Weinert, B. T., Choudhary, Chunaram & Matthias, P., Jan 2019, In: Nature Chemical Biology. 15, 1, p. 51-61

      Research output: Contribution to journal › Journal article › Research › peer-review

    21. Published

      Systems-wide analysis of BCR signalosomes and downstream phosphorylation and ubiquitylation

      Satpathy, S., Wagner, S. A., Beli, P., Gupta, R., Kristiansen, T. A., Malinova, D., Francavilla, C., Tolar, P., Bishop, G. A., Hostager, B. S. & Choudhary, Chunaram, 2015, In: Molecular Systems Biology. 11, 6, 810.

      Research output: Contribution to journal › Journal article › Research › peer-review

    22. Published

      Avoiding abundance bias in the functional annotation of posttranslationally modified proteins

      Schölz, C., Lyon, D., Refsgaard, J. C., Jensen, Lars Juhl, Choudhary, Chunaram & Weinert, B. T., Nov 2015, In: Nature Methods. 12, p. 1003-4 2 p.

      Research output: Contribution to journal › Comment/debate › Research › peer-review

    23. Published

      Acetylation site specificities of lysine deacetylase inhibitors in human cells

      Schölz, C., Weinert, B. T., Wagner, S. A., Beli, P., Miyake, Y., Qi, J., Jensen, Lars Juhl, Streicher, W., McCarthy, A. R., Westwood, N. J., Lain, S., Cox, J., Matthias, P., Mann, M., Bradner, J. E. & Choudhary, Chunaram, 2015, In: Nature Biotechnology. 33, p. 415–423

      Research output: Contribution to journal › Journal article › Research › peer-review

    24. Published

      Equilibrium between nascent and parental MCM proteins protects replicating genomes

      Sedlackova, H., Rask, M., Gupta, R., Choudhary, Chunaram, Somyajit, K. & Lukas, Jiri, 2020, In: Nature. 587, p. 297-302 34 p.

      Research output: Contribution to journal › Journal article › Research › peer-review

    25. Published

      Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3

      Sol, E. M., Wagner, S. A., Weinert, B. T., Kumar, A., Kim, H., Deng, C. & Choudhary, Chunaram, 7 Dec 2012, In: PloS one. 7, 12, p. e50545

      Research output: Contribution to journal › Journal article › Research › peer-review

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    ID: 13781159